Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG8114-RA through 18771 annotations produced 1 hits



chr3L:7889213-7905051 (-) // 100.0 // (PEBBLE):

Annotation Number : CG8114
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1623785_a_at
Accessions : protein= , nucleotide= NP_001097540; /// NP_523965; /// NP_729306; /// NP_729307; /// NP_729308;
Pathway : "0000910 // cytokinesis // inferred from mutant phenotype /// 0000910 // cytokinesis // non-traceable author statement /
Interpro : actomyosin contractile ring assembly // inferred from mutant phenotype /// 0000915 // cytokinesis
FlyMine data for full length.
Homophila reports that CG8114 is a close match (6e-11) to human gene AAS;FGD1;FGDY (NP_004454), a gene associated with Aarskog-Scott syndrome, 305400 (3);Mental retardation, X-linked nonsyndromic (3).
BioGrid reports that CG8114 interacts with CG5814 CG5814 CG3938 CG8416 CG8416 CG8416 CG8416 CG1768 CG9774 CG15792 .


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain103 14 of 4 0.40Down
Head61 04 of 4 0.20Down
Eye16 23 of 4 0.07Down
Thoracicoabdominal ganglion162 44 of 4 0.70Down
Salivary gland948 274 of 4 3.82Up
Crop91 64 of 4 0.40Down
Midgut41 34 of 4 0.20Down
Tubule14 21 of 4 0.10Down
Hindgut220 54 of 4 0.90None
Heart212 294 of 4 0.85None
Fat body11 51 of 4 0.05Down
Ovary639 114 of 4 2.60Up
Testis93 44 of 4 0.40Down
Male accessory glands136 24 of 4 0.60Down
Virgin spermatheca18 12 of 4 0.07Down
Mated spermatheca27 23 of 4 0.11Down
Adult carcass75 84 of 4 0.30Down
Larval CNS310 214 of 4 1.25Up
Larval Salivary gland987 844 of 4 3.98Up
Larval midgut47 34 of 4 0.19Down
Larval tubule30 24 of 4 0.10Down
Larval hindgut129 84 of 4 0.52Down
Larval fat body34 53 of 4 0.10Down
Larval trachea83 114 of 4 0.34Down
Larval carcass170 54 of 4 0.69Down
S2 cells (growing)364 34 of 4 1.47Up
Whole fly248 164 of 4

Looking for CG8114-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime