Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG8159-RA through 18771 annotations produced 1 hits



(CG8159):

Annotation Number : CG8159
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037619
Gbrowse : chr3R:4552575-4554092 (+) // 100.0 //
Probeset : 1626998_at
Accessions : protein= NP_649823;, nucleotide= NM_141566;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005634 // nucleus // inferred from electronic annot
Interpro : 0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from p
FlyMine data for FBgn0037619.
Homophila reports that CG8159 is a close match (3e-12) to human gene GLIS2;NPHP7 (NP_115964), a gene associated with Nephronophthisis 7, 611498 (3).
BioGrid reports that CG8159 interacts with CG8569 CG8159 CG8966 CG9099 .
VDRC has 1 RNAi stocks for FBgn0037619 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain46 ± 14 of 4 1.10None
Head24 ± 24 of 4 0.60Down
Eye30 ± 24 of 4 0.76Down
Thoracicoabdominal ganglion34 ± 14 of 4 0.90None
Salivary gland40 ± 40 of 4 0.99None
Crop25 ± 22 of 4 0.60Down
Midgut35 ± 20 of 4 0.90None
Tubule35 ± 14 of 4 0.90Down
Hindgut24 ± 10 of 4 0.60Down
Heart15 ± 13 of 4 0.38Down
Fat body18 ± 20 of 4 0.46Down
Ovary80 ± 14 of 4 2.00Up
Testis4 ± 10 of 4 0.10Down
Male accessory glands37 ± 44 of 4 0.90None
Virgin spermatheca14 ± 31 of 4 0.37Down
Mated spermatheca17 ± 11 of 4 0.43Down
Adult carcass19 ± 40 of 4 0.50Down
Larval CNS36 ± 34 of 4 0.92None
Larval Salivary gland57 ± 24 of 4 1.43Up
Larval midgut22 ± 20 of 4 0.55Down
Larval tubule85 ± 84 of 4 2.10Up
Larval hindgut27 ± 22 of 4 0.67Down
Larval fat body9 ± 30 of 4 0.20Down
Larval trachea26 ± 32 of 4 0.66Down
Larval carcass17 ± 10 of 4 0.42Down
S2 cells (growing)52 ± 24 of 4 1.29Up
Whole fly40 ± 24 of 4

Looking for CG8159-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime