Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG8249-RA through 18771 annotations produced 1 hits



(CG8249):

Annotation Number : CG8249
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034045
Gbrowse : chr2R:11731594-11734865 (-) // 100.0 //
Probeset : 1640126_at
Accessions : protein= NP_611060;, nucleotide= NM_137216;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0005215 // transporter activity // inferred from electronic annotation /// 0005355 // glucose transmembrane transporter
FlyMine data for FBgn0034045.
BDGP gene expression has embryonic in situ data for CG8249: 13 pix of staining in 9 body parts.
Homophila reports that CG8249 is a close match (8e-17) to human gene SLC2A4;GLUT4 (NP_001033), a gene associated with {Diabetes mellitus, noninsulin-dependent} (3).
VDRC has 3 RNAi stocks for FBgn0034045 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain21 ± 14 of 4 0.60Down
Head76 ± 74 of 4 2.10Up
Eye27 ± 44 of 4 0.76None
Thoracicoabdominal ganglion26 ± 24 of 4 0.70Down
Salivary gland18 ± 21 of 4 0.52Down
Crop19 ± 13 of 4 0.50Down
Midgut215 ± 54 of 4 5.90Up
Tubule334 ± 314 of 4 9.20Up
Hindgut167 ± 104 of 4 4.60Up
Heart36 ± 24 of 4 1.01None
Fat body152 ± 534 of 4 4.20Up
Ovary5 ± 10 of 4 0.10Down
Testis4 ± 11 of 4 0.10Down
Male accessory glands4 ± 10 of 4 0.10Down
Virgin spermatheca239 ± 114 of 4 6.60Up
Mated spermatheca100 ± 84 of 4 2.77Up
Adult carcass121 ± 44 of 4 3.30Up
Larval CNS11 ± 43 of 4 0.30Down
Larval Salivary gland4 ± 10 of 4 0.12Down
Larval midgut52 ± 94 of 4 1.44None
Larval tubule186 ± 94 of 4 5.10Up
Larval hindgut99 ± 114 of 4 2.73Up
Larval fat body19 ± 33 of 4 0.50Down
Larval trachea9 ± 10 of 4 0.27Down
Larval carcass118 ± 154 of 4 3.27Up
S2 cells (growing)8 ± 00 of 4 0.24Down
Whole fly36 ± 14 of 4

Looking for CG8249-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime