FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG8282-RA through 18771 annotations produced 1 hits

Snx6 (Snx6):

Annotation Number : CG8282
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032005
Gbrowse : chr2L:8218065-8220737 (-) // 100.0 //
Probeset : 1626945_at
Accessions : protein= NP_609199;, nucleotide= NM_135355;
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physic
FlyMine data for FBgn0032005.
BDGP gene expression has embryonic in situ data for CG8282: 10 pix of staining in 4 body parts.
TRiP has 1 RNAi stocks for FBgn0032005 available for purchase.
VDRC has 3 RNAi stocks for FBgn0032005 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	275 ± 7	4 of 4	0.90	Down
Head	287 ± 7	4 of 4	0.90	None
Eye	217 ± 8	4 of 4	0.69	Down
Thoracicoabdominal ganglion	246 ± 5	4 of 4	0.80	Down
Salivary gland	328 ± 17	4 of 4	1.05	None
Crop	219 ± 2	4 of 4	0.70	Down
Midgut	398 ± 12	4 of 4	1.30	Up
Tubule	263 ± 7	4 of 4	0.80	Down
Hindgut	267 ± 9	4 of 4	0.90	Down
Heart	688 ± 31	4 of 4	2.20	Up
Fat body	386 ± 28	4 of 4	1.24	Up
Ovary	459 ± 10	4 of 4	1.50	Up
Testis	370 ± 14	4 of 4	1.20	Up
Male accessory glands	375 ± 2	4 of 4	1.20	Up
Virgin spermatheca	398 ± 8	4 of 4	1.27	Up
Mated spermatheca	360 ± 24	4 of 4	1.15	None
Adult carcass	264 ± 17	4 of 4	0.80	None
Larval CNS	306 ± 20	4 of 4	0.98	None
Larval Salivary gland	692 ± 22	4 of 4	2.21	Up
Larval midgut	568 ± 30	4 of 4	1.82	Up
Larval tubule	854 ± 14	4 of 4	2.70	Up
Larval hindgut	477 ± 25	4 of 4	1.53	Up
Larval fat body	874 ± 69	4 of 4	2.80	Up
Larval trachea	413 ± 40	4 of 4	1.32	Up
Larval carcass	295 ± 26	4 of 4	0.94	None
S2 cells (growing)	1552 ± 6	4 of 4	4.96	Up
Whole fly	313 ± 9	4 of 4

Looking for CG8282-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720