FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG8284-RA through 18771 annotations produced 1 hits

Ubiquitin conjugating enzyme 4 (UbcD4):

Annotation Number : CG8284
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0015321
Gbrowse : chr3L:9691441-9693581 (+) // 100.0 //
Probeset : 1628595_at
Accessions : protein= NP_524010;, nucleotide= NM_079286;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004842 // ubiquitin-protein ligase activity //
FlyMine data for FBgn0015321.
BDGP gene expression has embryonic in situ data for UbcD4: 4 pix of staining in 1 body parts.
Homophila reports that CG8284 is a close match (2e-13) to human gene RAD6A;UBE2A (NP_003327), a gene associated with Mental retardation, X-linked syndromic (3).
TRiP has 1 RNAi stocks for FBgn0015321 available for purchase.
VDRC has 3 RNAi stocks for FBgn0015321 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	187 ± 6	4 of 4	0.80	Down
Head	138 ± 2	4 of 4	0.60	Down
Eye	132 ± 11	4 of 4	0.57	Down
Thoracicoabdominal ganglion	151 ± 8	4 of 4	0.70	Down
Salivary gland	245 ± 9	4 of 4	1.06	None
Crop	129 ± 5	4 of 4	0.60	Down
Midgut	123 ± 7	4 of 4	0.50	Down
Tubule	191 ± 9	4 of 4	0.80	Down
Hindgut	119 ± 3	4 of 4	0.50	Down
Heart	138 ± 4	4 of 4	0.60	Down
Fat body	229 ± 12	4 of 4	0.99	None
Ovary	500 ± 9	4 of 4	2.20	Up
Testis	96 ± 4	4 of 4	0.40	Down
Male accessory glands	201 ± 10	4 of 4	0.90	None
Virgin spermatheca	309 ± 11	4 of 4	1.33	Up
Mated spermatheca	348 ± 11	4 of 4	1.50	Up
Adult carcass	122 ± 6	4 of 4	0.50	Down
Larval CNS	334 ± 40	4 of 4	1.44	Up
Larval Salivary gland	167 ± 9	4 of 4	0.72	Down
Larval midgut	146 ± 1	4 of 4	0.63	Down
Larval tubule	230 ± 10	4 of 4	1.00	None
Larval hindgut	159 ± 0	4 of 4	0.69	Down
Larval fat body	208 ± 17	4 of 4	0.90	None
Larval trachea	146 ± 15	4 of 4	0.63	Down
Larval carcass	175 ± 5	4 of 4	0.76	Down
S2 cells (growing)	238 ± 2	4 of 4	1.03	None
Whole fly	232 ± 2	4 of 4

Looking for CG8284-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720