Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG8351-RA through 18771 annotations produced 1 hits



CG8351 (Tcp-1eta):

Annotation Number : CG8351
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037632
Gbrowse : chr3R:4627274-4631958 (+) // 100.0 //
Probeset : 1626845_at
Accessions : protein= NP_649835;, nucleotide= NM_141578;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005832 // chaperonin-containing T-complex // inferred f
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from el
FlyMine data for FBgn0037632.
Homophila reports that CG8351 is a close match (3e-54) to human gene CCT5;CCTE;KIAA0098 (NP_036205), a gene associated with Neuropathy, hereditary sensory, with spastic paraplegia, 256840 (3).
BioGrid reports that CG8351 interacts with CG8609 .
TRiP has 1 RNAi stocks for FBgn0037632 available for purchase.
VDRC has 2 RNAi stocks for FBgn0037632 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain178 ± 54 of 4 0.20Down
Head266 ± 124 of 4 0.30Down
Eye278 ± 74 of 4 0.33Down
Thoracicoabdominal ganglion228 ± 64 of 4 0.30Down
Salivary gland247 ± 54 of 4 0.29Down
Crop589 ± 134 of 4 0.70Down
Midgut581 ± 214 of 4 0.70Down
Tubule588 ± 594 of 4 0.70Down
Hindgut440 ± 34 of 4 0.50Down
Heart382 ± 144 of 4 0.45Down
Fat body295 ± 254 of 4 0.35Down
Ovary1255 ± 304 of 4 1.50Up
Testis283 ± 74 of 4 0.30Down
Male accessory glands346 ± 264 of 4 0.40Down
Virgin spermatheca277 ± 204 of 4 0.33Down
Mated spermatheca371 ± 104 of 4 0.44Down
Adult carcass213 ± 114 of 4 0.30Down
Larval CNS981 ± 244 of 4 1.15Up
Larval Salivary gland791 ± 114 of 4 0.93Down
Larval midgut532 ± 354 of 4 0.63Down
Larval tubule362 ± 104 of 4 0.40Down
Larval hindgut693 ± 464 of 4 0.81Down
Larval fat body307 ± 304 of 4 0.40Down
Larval trachea1174 ± 2144 of 4 1.38None
Larval carcass856 ± 614 of 4 1.01None
S2 cells (growing)1238 ± 204 of 4 1.46Up
Whole fly850 ± 144 of 4

Looking for CG8351-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime