Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG8414-RA through 18771 annotations produced 1 hits



(CG8414):

Annotation Number : CG8414
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034073
Gbrowse : chr2R:11986806-11990108 (-) // 100.0 //
Probeset : 1634421_at
Accessions : protein= NP_611084;, nucleotide= NM_137240;
FlyMine data for FBgn0034073.
BDGP gene expression has embryonic in situ data for CG8414: 10 pix of staining in 11 body parts.
BioGrid reports that CG8414 interacts with CG9253 .
TRiP has 1 RNAi stocks for FBgn0034073 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain40 ± 04 of 4 0.30Down
Head40 ± 24 of 4 0.30Down
Eye27 ± 54 of 4 0.21Down
Thoracicoabdominal ganglion46 ± 14 of 4 0.40Down
Salivary gland62 ± 34 of 4 0.49Down
Crop49 ± 14 of 4 0.40Down
Midgut76 ± 54 of 4 0.60Down
Tubule71 ± 54 of 4 0.60Down
Hindgut46 ± 34 of 4 0.40Down
Heart35 ± 24 of 4 0.27Down
Fat body66 ± 104 of 4 0.52Down
Ovary320 ± 64 of 4 2.50Up
Testis36 ± 24 of 4 0.30Down
Male accessory glands81 ± 54 of 4 0.60Down
Virgin spermatheca79 ± 54 of 4 0.62Down
Mated spermatheca93 ± 44 of 4 0.73Down
Adult carcass47 ± 54 of 4 0.40Down
Larval CNS103 ± 64 of 4 0.81Down
Larval Salivary gland88 ± 34 of 4 0.69Down
Larval midgut67 ± 54 of 4 0.52Down
Larval tubule36 ± 24 of 4 0.30Down
Larval hindgut64 ± 74 of 4 0.50Down
Larval fat body28 ± 43 of 4 0.20Down
Larval trachea68 ± 104 of 4 0.54Down
Larval carcass66 ± 144 of 4 0.52Down
S2 cells (growing)104 ± 34 of 4 0.82Down
Whole fly128 ± 54 of 4

Looking for CG8414-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime