FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG8432-RA through 18771 annotations produced 1 hits

rab escort protein (Rep):

Annotation Number : CG8432
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026378
Gbrowse : chr2R:15379595-15381630 (+) // 100.0 //
Probeset : 1631388_at
Accessions : protein= NP_477420;, nucleotide= NM_058072;
Pathway : 0000922 // spindle pole // inferred from direct assay /// 0000922 // spindle pole // inferred from electronic annotation
Interpro : 0004663 // Rab geranylgeranyltransferase activity // inferred from sequence or structural similarity /// 0005096 // GTPa
FlyMine data for FBgn0026378.
Homophila reports that CG8432 is a close match (4e-22) to human gene GDI1;MRX41;MRX48;RABGD1A (NP_001484), a gene associated with Mental retardation, X-linked nonspecific, 309541 (3).
TRiP has 1 RNAi stocks for FBgn0026378 available for purchase.
VDRC has 2 RNAi stocks for FBgn0026378 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	97 ± 4	4 of 4	1.30	Up
Head	68 ± 4	4 of 4	0.90	None
Eye	49 ± 3	4 of 4	0.65	Down
Thoracicoabdominal ganglion	142 ± 7	4 of 4	1.90	Up
Salivary gland	131 ± 9	4 of 4	1.73	Up
Crop	105 ± 4	4 of 4	1.40	Up
Midgut	117 ± 8	4 of 4	1.50	Up
Tubule	150 ± 9	4 of 4	2.00	Up
Hindgut	93 ± 5	4 of 4	1.20	Up
Heart	79 ± 5	4 of 4	1.05	None
Fat body	68 ± 8	4 of 4	0.89	None
Ovary	131 ± 1	4 of 4	1.70	Up
Testis	11 ± 0	0 of 4	0.10	Down
Male accessory glands	68 ± 10	4 of 4	0.90	None
Virgin spermatheca	50 ± 2	4 of 4	0.67	Down
Mated spermatheca	67 ± 4	4 of 4	0.88	None
Adult carcass	51 ± 5	4 of 4	0.70	Down
Larval CNS	115 ± 2	4 of 4	1.52	Up
Larval Salivary gland	63 ± 10	4 of 4	0.84	None
Larval midgut	95 ± 4	4 of 4	1.26	Up
Larval tubule	134 ± 6	4 of 4	1.80	Up
Larval hindgut	118 ± 3	4 of 4	1.56	Up
Larval fat body	46 ± 6	3 of 4	0.60	Down
Larval trachea	113 ± 10	4 of 4	1.49	Up
Larval carcass	77 ± 8	4 of 4	1.02	None
S2 cells (growing)	224 ± 6	4 of 4	2.95	Up
Whole fly	76 ± 3	4 of 4

Looking for CG8432-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720