Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG8464-RA through 18771 annotations produced 1 hits



HtrA2 (HtrA2):

Annotation Number : CG8464
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038233
Gbrowse : chr3R:10335615-10337414 (-) // 100.0 //
Probeset : 1625928_at
Accessions : protein= NP_650366;, nucleotide= NM_142109;
Pathway : 0005739 // mitochondrion // inferred from direct assay /// 0005739 // mitochondrion // inferred from electronic annotati
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity /
FlyMine data for FBgn0038233.
BDGP gene expression has embryonic in situ data for CG8464: 11 pix of staining in 4 body parts.
Homophila reports that CG8464 is a close match (5e-23) to human gene HTRA2;OMI;PARK13;PRSS25 (NP_659540), a gene associated with Parkinson disease 13, 610297 (3).
TRiP has 1 RNAi stocks for FBgn0038233 available for purchase.
VDRC has 2 RNAi stocks for FBgn0038233 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain32 ± 34 of 4 0.50Down
Head33 ± 44 of 4 0.50Down
Eye16 ± 14 of 4 0.22Down
Thoracicoabdominal ganglion33 ± 44 of 4 0.50Down
Salivary gland72 ± 94 of 4 1.01None
Crop36 ± 34 of 4 0.50Down
Midgut36 ± 14 of 4 0.50Down
Tubule20 ± 33 of 4 0.30Down
Hindgut43 ± 34 of 4 0.60Down
Heart16 ± 04 of 4 0.23Down
Fat body32 ± 64 of 4 0.45Down
Ovary60 ± 24 of 4 0.80None
Testis459 ± 74 of 4 6.40Up
Male accessory glands24 ± 14 of 4 0.30Down
Virgin spermatheca20 ± 13 of 4 0.28Down
Mated spermatheca19 ± 14 of 4 0.27Down
Adult carcass46 ± 14 of 4 0.60Down
Larval CNS25 ± 14 of 4 0.35Down
Larval Salivary gland30 ± 43 of 4 0.42Down
Larval midgut27 ± 24 of 4 0.37Down
Larval tubule28 ± 04 of 4 0.40Down
Larval hindgut28 ± 14 of 4 0.39Down
Larval fat body88 ± 264 of 4 1.20None
Larval trachea13 ± 04 of 4 0.19Down
Larval carcass26 ± 14 of 4 0.37Down
S2 cells (growing)36 ± 14 of 4 0.50Down
Whole fly72 ± 44 of 4

Looking for CG8464-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime