FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG8549-RA through 18771 annotations produced 1 hits

(CG8549):

Annotation Number : CG8549
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035714
Gbrowse : chr3L:6746012-6747137 (+) // 100.0 //
Probeset : 1626412_at
Accessions : protein= NP_648057;, nucleotide= NM_139800;
FlyMine data for FBgn0035714.
Homophila reports that CG8549 is a close match (2e-62) to human gene SBDS;SDS (NP_057122), a gene associated with Shwachman-Bodian-Diamond syndrome, 260400 (3).
VDRC has 2 RNAi stocks for FBgn0035714 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	57 ± 1	4 of 4	0.30	Down
Head	103 ± 1	4 of 4	0.60	Down
Eye	95 ± 4	4 of 4	0.57	Down
Thoracicoabdominal ganglion	46 ± 5	4 of 4	0.30	Down
Salivary gland	42 ± 7	4 of 4	0.26	Down
Crop	105 ± 4	4 of 4	0.60	Down
Midgut	153 ± 1	4 of 4	0.90	Down
Tubule	154 ± 8	4 of 4	0.90	None
Hindgut	106 ± 2	4 of 4	0.60	Down
Heart	209 ± 6	4 of 4	1.27	Up
Fat body	162 ± 16	4 of 4	0.98	None
Ovary	216 ± 4	4 of 4	1.30	Up
Testis	393 ± 5	4 of 4	2.40	Up
Male accessory glands	126 ± 11	4 of 4	0.80	Down
Virgin spermatheca	188 ± 13	4 of 4	1.14	None
Mated spermatheca	152 ± 7	4 of 4	0.92	None
Adult carcass	138 ± 6	4 of 4	0.80	Down
Larval CNS	113 ± 3	4 of 4	0.68	Down
Larval Salivary gland	83 ± 1	4 of 4	0.50	Down
Larval midgut	67 ± 6	4 of 4	0.40	Down
Larval tubule	181 ± 2	4 of 4	1.10	Up
Larval hindgut	88 ± 6	4 of 4	0.54	Down
Larval fat body	159 ± 22	4 of 4	1.00	None
Larval trachea	224 ± 14	4 of 4	1.35	Up
Larval carcass	83 ± 0	4 of 4	0.50	Down
S2 cells (growing)	158 ± 1	4 of 4	0.96	None
Whole fly	165 ± 3	4 of 4

Looking for CG8549-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720