FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG8593-RA through 18771 annotations produced 1 hits

geranylgeranyl pyrophosphate synthase (qm):

Annotation Number : CG8593
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0019662
Gbrowse : chr3L:7341414-7346731 (+) // 100.0 //
Probeset : 1635967_at
Accessions : protein= NP_001163370; /// NP_523958;, nucleotide= NM_001169899; /// NM_079234;
Interpro : 0004161 // dimethylallyltranstransferase activity // inferred from sequence or structural similarity /// 0004161 // dime
FlyMine data for FBgn0019662.
BDGP gene expression has embryonic in situ data for qm: 16 pix of staining in 4 body parts.
VDRC has 3 RNAi stocks for FBgn0019662 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	280 ± 6	4 of 4	4.10	Up
Head	141 ± 10	4 of 4	2.10	Up
Eye	224 ± 14	4 of 4	3.29	Up
Thoracicoabdominal ganglion	157 ± 3	4 of 4	2.30	Up
Salivary gland	52 ± 4	4 of 4	0.77	None
Crop	179 ± 7	4 of 4	2.60	Up
Midgut	115 ± 9	4 of 4	1.70	Up
Tubule	30 ± 1	4 of 4	0.40	Down
Hindgut	66 ± 1	4 of 4	1.00	None
Heart	58 ± 5	4 of 4	0.85	None
Fat body	36 ± 3	4 of 4	0.54	Down
Ovary	70 ± 1	4 of 4	1.00	None
Testis	47 ± 1	4 of 4	0.70	Down
Male accessory glands	44 ± 9	4 of 4	0.70	None
Virgin spermatheca	36 ± 1	4 of 4	0.53	Down
Mated spermatheca	35 ± 1	4 of 4	0.51	Down
Adult carcass	41 ± 2	4 of 4	0.60	Down
Larval CNS	114 ± 16	4 of 4	1.67	Up
Larval Salivary gland	43 ± 2	4 of 4	0.64	Down
Larval midgut	156 ± 13	4 of 4	2.29	Up
Larval tubule	87 ± 2	4 of 4	1.30	Up
Larval hindgut	84 ± 3	4 of 4	1.24	Up
Larval fat body	43 ± 3	4 of 4	0.60	Down
Larval trachea	48 ± 6	4 of 4	0.71	Down
Larval carcass	47 ± 3	4 of 4	0.69	Down
S2 cells (growing)	127 ± 5	4 of 4	1.87	Up
Whole fly	68 ± 5	4 of 4

Looking for CG8593-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720