FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG8598-RA through 18771 annotations produced 1 hits

Drosophila eco1 (eco):

Annotation Number : CG8598
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035766
Gbrowse : chr3L:7328428-7332089 (-) // 100.0 //
Probeset : 1626056_a_at
Accessions : protein= NP_648106; /// NP_729236;, nucleotide= NM_139849; /// NM_168201;
Pathway : 0000790 // nuclear chromatin // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from
Interpro : 0003684 // damaged DNA binding // inferred from electronic annotation /// 0003887 // DNA-directed DNA polymerase activit
FlyMine data for FBgn0035766.
BDGP gene expression has embryonic in situ data for CG8598: 11 pix of staining in 5 body parts.
Homophila reports that CG8598 is a close match (2e-21) to human gene ESCO2 (NP_001017420), a gene associated with Roberts syndrome, 268300 (3);SC phocomelia syndrome, 269000 (3).
BioGrid reports that CG8598 interacts with CG9797 .
TRiP has 2 RNAi stocks for FBgn0035766 available for purchase.
VDRC has 2 RNAi stocks for FBgn0035766 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	22 ± 1	4 of 4	0.10	Down
Head	57 ± 5	4 of 4	0.30	Down
Eye	33 ± 3	4 of 4	0.17	Down
Thoracicoabdominal ganglion	30 ± 1	4 of 4	0.20	Down
Salivary gland	140 ± 11	4 of 4	0.74	Down
Crop	85 ± 3	4 of 4	0.40	Down
Midgut	97 ± 3	4 of 4	0.50	Down
Tubule	141 ± 5	4 of 4	0.70	Down
Hindgut	90 ± 5	4 of 4	0.50	Down
Heart	42 ± 2	4 of 4	0.22	Down
Fat body	99 ± 17	4 of 4	0.52	Down
Ovary	361 ± 5	4 of 4	1.90	Up
Testis	91 ± 3	4 of 4	0.50	Down
Male accessory glands	131 ± 20	4 of 4	0.70	None
Virgin spermatheca	176 ± 13	4 of 4	0.92	None
Mated spermatheca	190 ± 8	4 of 4	1.00	None
Adult carcass	81 ± 4	4 of 4	0.40	Down
Larval CNS	188 ± 7	4 of 4	0.99	None
Larval Salivary gland	224 ± 3	4 of 4	1.18	Up
Larval midgut	98 ± 3	4 of 4	0.52	Down
Larval tubule	81 ± 5	4 of 4	0.40	Down
Larval hindgut	124 ± 7	4 of 4	0.65	Down
Larval fat body	77 ± 6	3 of 4	0.40	Down
Larval trachea	103 ± 7	4 of 4	0.54	Down
Larval carcass	143 ± 4	4 of 4	0.75	Down
S2 cells (growing)	223 ± 10	4 of 4	1.18	None
Whole fly	190 ± 9	4 of 4

Looking for CG8598-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720