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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG8827-RA through 18771 annotations produced 1 hits



anon-fast-evolving-3D10 (Ance):

Annotation Number : CG8827
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0012037
Gbrowse : chr2L:13905644-13909176 (+) // 100.0 //
Probeset : 1632431_s_at
Accessions : protein= NP_477046; /// NP_723852;, nucleotide= NM_057698; /// NM_165070;
Pathway : 0005576 // extracellular region // non-traceable author statement /// 0005576 // extracellular region // inferred from e
Interpro : 0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0008233 // peptidase activity // inferre
FlyMine data for FBgn0012037.
BDGP gene expression has embryonic in situ data for Ance: 61 pix of staining in 22 body parts.
Homophila reports that CG8827 is a close match (7e-151) to human gene ACE;ACE1;DCP1 (NP_000780), a gene associated with Renal tubular dysgenesis, 267430 (3);[Angiotensin I-converting enzyme, benign serum increase] (3);{Alzheimer disease, susceptibility to}, 104300 (3);{Diabetic nephropathy, susceptibility to}, 603933 (3);{Myocardial infarction, susceptibility to} (3);{SARS, progression of} (3).
TRiP has 1 RNAi stocks for FBgn0012037 available for purchase.
VDRC has 1 RNAi stocks for FBgn0012037 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain101 34 of 4 0.30Down
Head193 74 of 4 0.50Down
Eye156 94 of 4 0.39Down
Thoracicoabdominal ganglion213 114 of 4 0.50Down
Salivary gland1480 464 of 4 3.69Up
Crop40 54 of 4 0.10Down
Midgut3626 934 of 4 9.00Up
Tubule30 64 of 4 0.10Down
Hindgut470 344 of 4 1.20None
Heart490 304 of 4 1.22None
Fat body493 934 of 4 1.23None
Ovary19 14 of 4 0.00Down
Testis246 184 of 4 0.60Down
Male accessory glands320 204 of 4 0.80Down
Virgin spermatheca339 144 of 4 0.85None
Mated spermatheca410 154 of 4 1.02None
Adult carcass397 124 of 4 1.00None
Larval CNS120 124 of 4 0.30Down
Larval Salivary gland86 24 of 4 0.22Down
Larval midgut2694 1884 of 4 6.72Up
Larval tubule275 384 of 4 0.70Down
Larval hindgut902 834 of 4 2.25Up
Larval fat body836 1024 of 4 2.10Up
Larval trachea2858 4544 of 4 7.13Up
Larval carcass676 1344 of 4 1.69None
S2 cells (growing)171 244 of 4 0.43Down
Whole fly401 234 of 4

Looking for CG8827-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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