FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG8857-RB through 18771 annotations produced 3 hits

Ribosomal protein S11 (RpS11):

Annotation Number : CG8857
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033699
Gbrowse : chr2R:8086887-8088333 (-) // 100.0 //
Probeset : 1630252_at
Accessions : protein= NP_725114; /// NP_725115;, nucleotide= NM_165868; /// NM_165869;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic anno
Interpro : 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // infer
FlyMine data for FBgn0033699.
BioGrid reports that CG8857 interacts with CG8933 CG9902 .
VDRC has 2 RNAi stocks for FBgn0033699 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	187 ± 7	4 of 4	1.70	Up
Head	283 ± 17	4 of 4	2.60	Up
Eye	418 ± 41	4 of 4	3.86	Up
Thoracicoabdominal ganglion	34 ± 2	4 of 4	0.30	Down
Salivary gland	17 ± 6	0 of 4	0.16	Down
Crop	34 ± 3	4 of 4	0.30	Down
Midgut	18 ± 3	3 of 4	0.20	Down
Tubule	11 ± 1	0 of 4	0.10	Down
Hindgut	151 ± 9	4 of 4	1.40	Up
Heart	27 ± 2	4 of 4	0.25	Down
Fat body	27 ± 3	3 of 4	0.26	Down
Ovary	18 ± 1	4 of 4	0.20	Down
Testis	11 ± 3	0 of 4	0.10	Down
Male accessory glands	30 ± 2	2 of 4	0.30	Down
Virgin spermatheca	15 ± 1	0 of 4	0.15	Down
Mated spermatheca	12 ± 2	1 of 4	0.12	Down
Adult carcass	359 ± 46	4 of 4	3.30	Up
Larval CNS	69 ± 5	4 of 4	0.64	Down
Larval Salivary gland	22 ± 2	3 of 4	0.21	Down
Larval midgut	13 ± 3	1 of 4	0.13	Down
Larval tubule	17 ± 1	2 of 4	0.20	Down
Larval hindgut	35 ± 3	4 of 4	0.32	Down
Larval fat body	34 ± 3	0 of 4	0.30	Down
Larval trachea	31 ± 7	4 of 4	0.29	Down
Larval carcass	40 ± 4	4 of 4	0.37	Down
S2 cells (growing)	31 ± 2	4 of 4	0.29	Down
Whole fly	108 ± 5	4 of 4

Ribosomal protein S11 (RpS11):

Annotation Number : CG8857
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033699
Gbrowse : chr2R:8086523-8088333 (-) // 100.0 //
Probeset : 1639036_at
Accessions : protein= NP_725114; /// NP_725115;, nucleotide= NM_165868; /// NM_165869;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic anno
Interpro : 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // infer
FlyMine data for FBgn0033699.
BioGrid reports that CG8857 interacts with CG8933 CG9902 .
VDRC has 2 RNAi stocks for FBgn0033699 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	130 ± 2	4 of 4	0.40	Down
Head	136 ± 11	4 of 4	0.40	Down
Eye	168 ± 12	4 of 4	0.48	Down
Thoracicoabdominal ganglion	298 ± 22	4 of 4	0.80	None
Salivary gland	269 ± 21	4 of 4	0.76	None
Crop	153 ± 6	4 of 4	0.40	Down
Midgut	150 ± 6	4 of 4	0.40	Down
Tubule	159 ± 9	4 of 4	0.50	Down
Hindgut	190 ± 7	4 of 4	0.50	Down
Heart	185 ± 14	4 of 4	0.52	Down
Fat body	177 ± 29	4 of 4	0.50	Down
Ovary	464 ± 14	4 of 4	1.30	Up
Testis	28 ± 2	4 of 4	0.10	Down
Male accessory glands	74 ± 7	4 of 4	0.20	Down
Virgin spermatheca	545 ± 34	4 of 4	1.54	Up
Mated spermatheca	499 ± 17	4 of 4	1.41	Up
Adult carcass	139 ± 12	4 of 4	0.40	Down
Larval CNS	862 ± 71	4 of 4	2.44	Up
Larval Salivary gland	252 ± 5	4 of 4	0.71	Down
Larval midgut	147 ± 28	4 of 4	0.42	Down
Larval tubule	199 ± 14	4 of 4	0.60	Down
Larval hindgut	341 ± 37	4 of 4	0.97	None
Larval fat body	274 ± 33	4 of 4	0.80	None
Larval trachea	839 ± 145	4 of 4	2.38	Up
Larval carcass	479 ± 29	4 of 4	1.36	Up
S2 cells (growing)	1365 ± 13	4 of 4	3.87	Up
Whole fly	353 ± 27	4 of 4

Ribosomal protein S11 (RpS11):

Annotation Number : CG8857
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033699
Gbrowse : chr2R:8086887-8088333 (-) // 100.0 //
Probeset : 1638068_a_at
Accessions : protein= NP_725114; /// NP_725115;, nucleotide= NM_165868; /// NM_165869;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // inferred from electronic anno
Interpro : 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // infer
FlyMine data for FBgn0033699.
BioGrid reports that CG8857 interacts with CG8933 CG9902 .
VDRC has 2 RNAi stocks for FBgn0033699 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2593 ± 63	4 of 4	0.70	Down
Head	4262 ± 156	4 of 4	1.10	None
Eye	5627 ± 82	4 of 4	1.47	Up
Thoracicoabdominal ganglion	3640 ± 106	4 of 4	1.00	None
Salivary gland	10995 ± 473	4 of 4	2.87	Up
Crop	5447 ± 282	4 of 4	1.40	Up
Midgut	4970 ± 107	4 of 4	1.30	Up
Tubule	5130 ± 99	4 of 4	1.30	Up
Hindgut	4520 ± 99	4 of 4	1.20	None
Heart	6013 ± 399	4 of 4	1.57	Up
Fat body	5426 ± 622	4 of 4	1.42	Up
Ovary	3141 ± 36	4 of 4	0.80	None
Testis	1188 ± 14	4 of 4	0.30	Down
Male accessory glands	8331 ± 247	4 of 4	2.20	Up
Virgin spermatheca	5731 ± 200	4 of 4	1.50	Up
Mated spermatheca	5828 ± 211	4 of 4	1.52	Up
Adult carcass	5170 ± 294	4 of 4	1.40	Up
Larval CNS	2629 ± 178	4 of 4	0.69	Down
Larval Salivary gland	7466 ± 398	4 of 4	1.95	Up
Larval midgut	4345 ± 153	4 of 4	1.14	None
Larval tubule	4422 ± 93	4 of 4	1.20	None
Larval hindgut	4138 ± 20	4 of 4	1.08	None
Larval fat body	7250 ± 757	4 of 4	1.90	Up
Larval trachea	5930 ± 99	4 of 4	1.55	Up
Larval carcass	4204 ± 283	4 of 4	1.10	None
S2 cells (growing)	4270 ± 72	4 of 4	1.12	None
Whole fly	3826 ± 252	4 of 4

Looking for CG8857-RB. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720