Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG8864-RA through 18771 annotations produced 1 hits



Cyp28a5 (Cyp28a5):

Annotation Number : CG8864
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028940
Gbrowse : chr2L:13977302-13979569 (+) // 99.77 //
Probeset : 1629009_at
Accessions : protein= NP_609694;, nucleotide= NM_135850;
Pathway : 0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005789 // endoplasmic reticulum membrane //
Interpro : 0004497 // monooxygenase activity // inferred from electronic annotation /// 0005506 // iron ion binding // inferred fro
FlyMine data for FBgn0028940.
BDGP gene expression has embryonic in situ data for Cyp28a5: 13 pix of staining in 4 body parts.
Homophila reports that CG8864 is a close match (2e-11) to human gene CYP2C9 (NP_000762), a gene associated with Tolbutamide poor metabolizer (3);Warfarin sensitivity, 122700 (3).
VDRC has 1 RNAi stocks for FBgn0028940 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain725 ± 184 of 4 5.70Up
Head670 ± 174 of 4 5.20Up
Eye474 ± 164 of 4 3.71Up
Thoracicoabdominal ganglion897 ± 164 of 4 7.00Up
Salivary gland117 ± 114 of 4 0.92None
Crop7 ± 11 of 4 0.10Down
Midgut610 ± 424 of 4 4.80Up
Tubule163 ± 424 of 4 1.30None
Hindgut318 ± 184 of 4 2.50Up
Heart1037 ± 334 of 4 8.11Up
Fat body336 ± 174 of 4 2.63Up
Ovary0 ± 00 of 4 0.00Down
Testis3 ± 10 of 4 0.00Down
Male accessory glands9 ± 11 of 4 0.10Down
Virgin spermatheca567 ± 464 of 4 4.44Up
Mated spermatheca267 ± 284 of 4 2.09Up
Adult carcass367 ± 184 of 4 2.90Up
Larval CNS446 ± 1064 of 4 3.49Up
Larval Salivary gland75 ± 74 of 4 0.59Down
Larval midgut995 ± 1254 of 4 7.79Up
Larval tubule43 ± 104 of 4 0.30Down
Larval hindgut583 ± 334 of 4 4.56Up
Larval fat body1287 ± 1944 of 410.10Up
Larval trachea2013 ± 5354 of 415.75Up
Larval carcass287 ± 164 of 4 2.25Up
S2 cells (growing)1 ± 00 of 4 0.01Down
Whole fly127 ± 174 of 4

Looking for CG8864-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime