FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG8884-RB through 18771 annotations produced 1 hits

Synapse-associated protein 47kD (Sap47):

Annotation Number : CG8884
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0013334
Gbrowse : chr3R:11760840-11783119 (+) // 99.51 //
Probeset : 1630169_a_at
Accessions : protein= NP_524371; /// NP_732088; /// NP_732089; /// NP_732090; /// NP_732091; /// NP_732092; /// NP_732093; /// NP_732094;, nucleotide= NM_079647; /// NM_169684; /// NM_169685; /// NM_169686; /// NM_169687; /// NM_169688; /// NM_169689; /// NM_169690;
Pathway : 0045202 // synapse // inferred from direct assay
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0013334.
BioGrid reports that CG8884 interacts with CG9654 .
TRiP has 1 RNAi stocks for FBgn0013334 available for purchase.
VDRC has 2 RNAi stocks for FBgn0013334 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1928 ± 35	4 of 4	15.20	Up
Head	749 ± 54	4 of 4	5.90	Up
Eye	1244 ± 87	4 of 4	9.79	Up
Thoracicoabdominal ganglion	2787 ± 76	4 of 4	21.90	Up
Salivary gland	62 ± 7	4 of 4	0.49	Down
Crop	29 ± 6	4 of 4	0.20	Down
Midgut	21 ± 1	4 of 4	0.20	Down
Tubule	18 ± 0	4 of 4	0.10	Down
Hindgut	24 ± 1	4 of 4	0.20	Down
Heart	21 ± 0	4 of 4	0.17	Down
Fat body	43 ± 13	4 of 4	0.34	Down
Ovary	6 ± 0	4 of 4	0.10	Down
Testis	5 ± 1	2 of 4	0.00	Down
Male accessory glands	40 ± 3	4 of 4	0.30	Down
Virgin spermatheca	54 ± 8	4 of 4	0.43	Down
Mated spermatheca	80 ± 16	4 of 4	0.63	None
Adult carcass	54 ± 11	4 of 4	0.40	Down
Larval CNS	189 ± 13	4 of 4	1.49	Up
Larval Salivary gland	37 ± 3	4 of 4	0.29	Down
Larval midgut	9 ± 1	3 of 4	0.08	Down
Larval tubule	21 ± 2	4 of 4	0.20	Down
Larval hindgut	14 ± 0	4 of 4	0.12	Down
Larval fat body	16 ± 2	3 of 4	0.10	Down
Larval trachea	57 ± 39	4 of 4	0.45	Down
Larval carcass	15 ± 1	4 of 4	0.13	Down
S2 cells (growing)	13 ± 0	4 of 4	0.11	Down
Whole fly	127 ± 18	4 of 4

Looking for CG8884-RB. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720