FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG8977-RA through 18771 annotations produced 1 hits

predicted gene Y (Cctgamma):

Annotation Number : CG8977
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0015019
Gbrowse : chr3R:12473328-12475700 (+) // 100.0 //
Probeset : 1634782_s_at
Accessions : protein= NP_650572; /// NP_732167;, nucleotide= NM_142315; /// NM_169727;
Pathway : 0005737 // cytoplasm // non-traceable author statement /// 0005737 // cytoplasm // inferred from electronic annotation /
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from el
FlyMine data for FBgn0015019.
BDGP gene expression has embryonic in situ data for Cctgamma: 38 pix of staining in 26 body parts.
Homophila reports that CG8977 is a close match (5e-23) to human gene CFD;PIP5K3 (NP_055855), a gene associated with Corneal fleck dystrophy, 121850 (3).
TRiP has 1 RNAi stocks for FBgn0015019 available for purchase.
VDRC has 3 RNAi stocks for FBgn0015019 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	144 ± 6	4 of 4	0.20	Down
Head	176 ± 4	4 of 4	0.30	Down
Eye	137 ± 3	4 of 4	0.22	Down
Thoracicoabdominal ganglion	164 ± 4	4 of 4	0.30	Down
Salivary gland	149 ± 15	4 of 4	0.24	Down
Crop	381 ± 6	4 of 4	0.60	Down
Midgut	357 ± 20	4 of 4	0.60	Down
Tubule	381 ± 34	4 of 4	0.60	Down
Hindgut	303 ± 5	4 of 4	0.50	Down
Heart	232 ± 10	4 of 4	0.37	Down
Fat body	174 ± 20	4 of 4	0.28	Down
Ovary	936 ± 10	4 of 4	1.50	Up
Testis	234 ± 8	4 of 4	0.40	Down
Male accessory glands	247 ± 4	4 of 4	0.40	Down
Virgin spermatheca	192 ± 8	4 of 4	0.31	Down
Mated spermatheca	277 ± 12	4 of 4	0.45	Down
Adult carcass	167 ± 8	4 of 4	0.30	Down
Larval CNS	701 ± 14	4 of 4	1.13	Up
Larval Salivary gland	604 ± 33	4 of 4	0.97	None
Larval midgut	375 ± 37	4 of 4	0.61	Down
Larval tubule	285 ± 7	4 of 4	0.50	Down
Larval hindgut	600 ± 40	4 of 4	0.97	None
Larval fat body	173 ± 7	4 of 4	0.30	Down
Larval trachea	1012 ± 153	4 of 4	1.63	Up
Larval carcass	617 ± 53	4 of 4	1.00	None
S2 cells (growing)	887 ± 13	4 of 4	1.43	Up
Whole fly	620 ± 17	4 of 4

Looking for CG8977-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720