FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG8980-RA through 18771 annotations produced 1 hits

Nuclear inhibitor of Protein phosphatase 1 (NiPp1):

Annotation Number : CG8980
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026402
Gbrowse : chr2R:12891061-12892604 (-) // 100.0 //
Probeset : 1627539_at
Accessions : protein= NP_611177;, nucleotide= NM_137333;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity /// 0016607 // nuclear speck // inferred from dire
Interpro : 0003729 // mRNA binding // inferred from direct assay /// 0004864 // phosphoprotein phosphatase inhibitor activity // in
FlyMine data for FBgn0026402.
BDGP gene expression has embryonic in situ data for NiPp-1: 4 pix of staining in 1 body parts.
BioGrid reports that CG8980 interacts with CG2096 CG9156 CG6593 CG7904 CG5650 CG10574 .
TRiP has 1 RNAi stocks for FBgn0026402 available for purchase.
VDRC has 3 RNAi stocks for FBgn0026402 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	157 ± 5	4 of 4	1.50	Up
Head	60 ± 2	4 of 4	0.60	Down
Eye	52 ± 2	4 of 4	0.52	Down
Thoracicoabdominal ganglion	90 ± 5	4 of 4	0.90	None
Salivary gland	63 ± 5	4 of 4	0.62	Down
Crop	51 ± 5	4 of 4	0.50	Down
Midgut	51 ± 2	4 of 4	0.50	Down
Tubule	28 ± 3	3 of 4	0.30	Down
Hindgut	37 ± 4	4 of 4	0.40	Down
Heart	24 ± 1	4 of 4	0.24	Down
Fat body	36 ± 2	4 of 4	0.36	Down
Ovary	178 ± 2	4 of 4	1.70	Up
Testis	181 ± 11	4 of 4	1.80	Up
Male accessory glands	30 ± 3	4 of 4	0.30	Down
Virgin spermatheca	25 ± 4	4 of 4	0.25	Down
Mated spermatheca	24 ± 1	4 of 4	0.24	Down
Adult carcass	34 ± 2	4 of 4	0.30	Down
Larval CNS	184 ± 7	4 of 4	1.80	Up
Larval Salivary gland	54 ± 3	4 of 4	0.53	Down
Larval midgut	45 ± 3	4 of 4	0.45	Down
Larval tubule	33 ± 1	4 of 4	0.30	Down
Larval hindgut	46 ± 2	4 of 4	0.46	Down
Larval fat body	52 ± 11	4 of 4	0.50	Down
Larval trachea	76 ± 12	4 of 4	0.75	Down
Larval carcass	50 ± 1	4 of 4	0.49	Down
S2 cells (growing)	134 ± 2	4 of 4	1.32	Up
Whole fly	102 ± 6	4 of 4

Looking for CG8980-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720