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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG9024-RA through 18771 annotations produced 1 hits



Accessory gland-specific peptide 26Ab (Acp26Ab):

Annotation Number : CG9024
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002856
Gbrowse : chr2L:5892353-5892862 (-) // 100.0 //
Probeset : 1624292_a_at
Accessions : protein= NP_476645; /// NP_599099;, nucleotide= NM_057297; /// NM_134272;
Pathway : 0005576 // extracellular region // inferred from electronic annotation /// 0005576 // extracellular region // non-tracea
Interpro : 0005179 // hormone activity // non-traceable author statement
FlyMine data for FBgn0002856.
VDRC has 2 RNAi stocks for FBgn0002856 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.00Down
Head1 ± 00 of 4 0.00Down
Eye0 ± 00 of 4 0.00Down
Thoracicoabdominal ganglion2 ± 10 of 4 0.00Down
Salivary gland6 ± 40 of 4 0.02Down
Crop1 ± 10 of 4 0.00Down
Midgut0 ± 00 of 4 0.00Down
Tubule1 ± 00 of 4 0.00Down
Hindgut0 ± 00 of 4 0.00Down
Heart1 ± 00 of 4 0.01Down
Fat body1 ± 10 of 4 0.01Down
Ovary2 ± 10 of 4 0.00Down
Testis27 ± 114 of 4 0.10Down
Male accessory glands7433 ± 2314 of 427.30Up
Virgin spermatheca0 ± 00 of 4 0.00Down
Mated spermatheca0 ± 00 of 4 0.00Down
Adult carcass15 ± 62 of 4 0.10Down
Larval CNS0 ± 00 of 4 0.00Down
Larval Salivary gland3 ± 10 of 4 0.01Down
Larval midgut2 ± 10 of 4 0.01Down
Larval tubule0 ± 00 of 4 0.00Down
Larval hindgut3 ± 10 of 4 0.01Down
Larval fat body1 ± 00 of 4 0.00Down
Larval trachea2 ± 10 of 4 0.01Down
Larval carcass3 ± 10 of 4 0.01Down
S2 cells (growing)1 ± 00 of 4 0.00Down
Whole fly272 ± 294 of 4

Looking for CG9024-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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