FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9028-RA through 18771 annotations produced 2 hits

CG9028 (ssp2):

Annotation Number : CG9028
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036389
Gbrowse : chr3L:13958328-13965120 (+) // 100.0 //
Probeset : 1632670_at
Accessions : protein= NP_648672;, nucleotide= NM_140415;
FlyMine data for FBgn0036389.
BDGP gene expression has embryonic in situ data for CG9028: 4 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0036389 available for purchase.
VDRC has 4 RNAi stocks for FBgn0036389 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	159 ± 4	4 of 4	0.80	None
Head	93 ± 5	4 of 4	0.50	Down
Eye	84 ± 6	4 of 4	0.43	Down
Thoracicoabdominal ganglion	191 ± 13	4 of 4	1.00	None
Salivary gland	93 ± 17	4 of 4	0.48	Down
Crop	198 ± 7	4 of 4	1.00	None
Midgut	63 ± 3	4 of 4	0.30	Down
Tubule	44 ± 1	4 of 4	0.20	Down
Hindgut	88 ± 4	4 of 4	0.50	Down
Heart	54 ± 6	4 of 4	0.28	Down
Fat body	68 ± 5	4 of 4	0.34	Down
Ovary	432 ± 6	4 of 4	2.20	Up
Testis	37 ± 0	4 of 4	0.20	Down
Male accessory glands	94 ± 8	4 of 4	0.50	Down
Virgin spermatheca	34 ± 2	4 of 4	0.17	Down
Mated spermatheca	37 ± 5	4 of 4	0.19	Down
Adult carcass	115 ± 2	4 of 4	0.60	Down
Larval CNS	134 ± 9	4 of 4	0.68	Down
Larval Salivary gland	102 ± 8	4 of 4	0.52	Down
Larval midgut	53 ± 3	3 of 4	0.27	Down
Larval tubule	88 ± 2	4 of 4	0.40	Down
Larval hindgut	89 ± 2	4 of 4	0.45	Down
Larval fat body	73 ± 7	4 of 4	0.40	Down
Larval trachea	94 ± 4	4 of 4	0.48	Down
Larval carcass	97 ± 8	4 of 4	0.49	Down
S2 cells (growing)	370 ± 7	4 of 4	1.88	Up
Whole fly	197 ± 12	4 of 4

CG9028 (ssp2):

Annotation Number : CG9028
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036389
Gbrowse : chr3L:13958304-13959026 (+) // 100.0 //
Probeset : 1634047_a_at
Accessions : protein= NP_648672;, nucleotide= NM_140415;
FlyMine data for FBgn0036389.
BDGP gene expression has embryonic in situ data for CG9028: 4 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0036389 available for purchase.
VDRC has 4 RNAi stocks for FBgn0036389 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	9 ± 1	4 of 4	0.60	None
Head	7 ± 2	2 of 4	0.50	None
Eye	4 ± 2	1 of 4	0.29	None
Thoracicoabdominal ganglion	4 ± 2	1 of 4	0.30	None
Salivary gland	9 ± 3	0 of 4	0.61	None
Crop	22 ± 5	4 of 4	1.50	None
Midgut	5 ± 1	0 of 4	0.40	None
Tubule	1 ± 0	0 of 4	0.10	Down
Hindgut	7 ± 0	4 of 4	0.50	None
Heart	5 ± 0	2 of 4	0.38	None
Fat body	5 ± 1	1 of 4	0.36	None
Ovary	35 ± 2	4 of 4	2.40	Up
Testis	2 ± 1	0 of 4	0.20	None
Male accessory glands	9 ± 2	3 of 4	0.60	None
Virgin spermatheca	3 ± 1	0 of 4	0.21	None
Mated spermatheca	3 ± 0	0 of 4	0.21	None
Adult carcass	8 ± 2	1 of 4	0.60	None
Larval CNS	4 ± 0	3 of 4	0.29	None
Larval Salivary gland	4 ± 0	2 of 4	0.33	None
Larval midgut	4 ± 1	0 of 4	0.31	None
Larval tubule	8 ± 1	3 of 4	0.60	None
Larval hindgut	4 ± 0	3 of 4	0.33	None
Larval fat body	7 ± 2	2 of 4	0.50	None
Larval trachea	6 ± 1	4 of 4	0.47	None
Larval carcass	2 ± 0	0 of 4	0.14	Down
S2 cells (growing)	70 ± 5	4 of 4	4.75	Up
Whole fly	14 ± 4	3 of 4

Looking for CG9028-RA. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720