Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG9035-RA through 18771 annotations produced 1 hits



Translocon-associated protein delta (Tapdelta):

Annotation Number : CG9035
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0021795
Gbrowse : chr2R:7257790-7258675 (-) // 100.0 //
Probeset : 1638890_at
Accessions : protein= NP_610679;, nucleotide= NM_136835;
Pathway : "0005783 // endoplasmic reticulum // inferred from electronic annotation /// 0005784 // Sec61 translocon complex // infe
Interpro : endoplasmic reticulum targeting // inferred from sequence or structural similarity /// 0005811 // lipid particle // inf
FlyMine data for FBgn0021795.
BDGP gene expression has embryonic in situ data for Tapdelta: 18 pix of staining in 23 body parts.
BioGrid reports that CG9035 interacts with CG9040 .
VDRC has 1 RNAi stocks for FBgn0021795 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain379 54 of 4 0.60Down
Head763 434 of 4 1.20None
Eye767 264 of 4 1.20None
Thoracicoabdominal ganglion396 114 of 4 0.60Down
Salivary gland2267 424 of 4 3.54Up
Crop477 164 of 4 0.70None
Midgut1219 334 of 4 1.90Up
Tubule917 874 of 4 1.40Up
Hindgut640 114 of 4 1.00None
Heart949 544 of 4 1.48Up
Fat body1682 1814 of 4 2.63Up
Ovary763 224 of 4 1.20None
Testis363 104 of 4 0.60Down
Male accessory glands2763 1104 of 4 4.30Up
Virgin spermatheca1630 1094 of 4 2.55Up
Mated spermatheca1764 1834 of 4 2.76Up
Adult carcass922 354 of 4 1.40Up
Larval CNS801 364 of 4 1.25None
Larval Salivary gland3321 1614 of 4 5.19Up
Larval midgut815 464 of 4 1.27None
Larval tubule583 194 of 4 0.90None
Larval hindgut896 544 of 4 1.40Up
Larval fat body1424 2134 of 4 2.20Up
Larval trachea1563 3994 of 4 2.44Up
Larval carcass1167 734 of 4 1.82Up
S2 cells (growing)1927 524 of 4 3.01Up
Whole fly640 564 of 4

Looking for CG9035-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime