FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9036-RA through 18771 annotations produced 1 hits

CG9036 (Cpr56F):

Annotation Number : CG9036
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0034499
Gbrowse : chr2R:16175859-16179448 (-) // 100.0 //
Probeset : 1626291_at
Accessions : protein= NP_611470;, nucleotide= NM_137626;
Interpro : 0005214 // structural constituent of chitin-based cuticle // inferred from sequence or structural similarity /// 0008010
FlyMine data for FBgn0034499.
BDGP gene expression has embryonic in situ data for CG9036: 12 pix of staining in 6 body parts.
BioGrid reports that CG9036 interacts with CG9102 CG9573 .
VDRC has 3 RNAi stocks for FBgn0034499 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	0.10	None
Head	2 ± 0	0 of 4	0.30	None
Eye	4 ± 2	1 of 4	0.47	None
Thoracicoabdominal ganglion	0 ± 0	0 of 4	0.10	Down
Salivary gland	11 ± 3	0 of 4	1.27	None
Crop	3 ± 2	0 of 4	0.40	None
Midgut	2 ± 0	0 of 4	0.20	None
Tubule	2 ± 0	0 of 4	0.20	Down
Hindgut	23 ± 2	4 of 4	2.50	Up
Heart	1 ± 0	0 of 4	0.17	None
Fat body	2 ± 1	0 of 4	0.27	None
Ovary	0 ± 0	0 of 4	0.10	Down
Testis	77 ± 3	4 of 4	8.40	Up
Male accessory glands	1 ± 0	0 of 4	0.20	None
Virgin spermatheca	12 ± 2	3 of 4	1.37	None
Mated spermatheca	9 ± 2	2 of 4	0.98	None
Adult carcass	2 ± 0	0 of 4	0.20	None
Larval CNS	3 ± 1	0 of 4	0.33	None
Larval Salivary gland	2 ± 1	0 of 4	0.22	None
Larval midgut	1 ± 0	0 of 4	0.13	None
Larval tubule	2 ± 1	0 of 4	0.30	None
Larval hindgut	1 ± 0	0 of 4	0.18	None
Larval fat body	15 ± 8	2 of 4	1.70	None
Larval trachea	15 ± 11	2 of 4	1.63	None
Larval carcass	7 ± 2	0 of 4	0.82	None
S2 cells (growing)	1 ± 0	0 of 4	0.16	None
Whole fly	9 ± 2	2 of 4

Looking for CG9036-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720