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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG9045-RA through 18771 annotations produced 1 hits



Myb oncogene-like (Myb):

Annotation Number : CG9045
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0002914
Gbrowse : chrX:15748889-15751836 (-) // 100.0 //
Probeset : 1627567_at
Accessions : protein= NP_511170; /// NP_996454; /// NP_996455; /// NP_996456; /// NP_996457;, nucleotide= NM_078615; /// NM_206731; /// NM_206732; /// NM_206733; /// NM_206734;
Pathway : DNA-dependent // inferred from direct assay /// 0007049 // cell cycle // inferred from genetic interaction /// 0007049
Interpro : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // non-traceable author sta
FlyMine data for FBgn0002914.
BDGP gene expression has embryonic in situ data for Myb: 4 pix of staining in 1 body parts.
BioGrid reports that CG9045 interacts with CG9071 CG3510 CG3510 CG4654 CG6376 CG6376 CG5363 CG5363 CG15319 CG15319 CG15319 CG15319 CG1395 CG1395 CG1395 .
TRiP has 2 RNAi stocks for FBgn0002914 available for purchase.
VDRC has 3 RNAi stocks for FBgn0002914 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain276 84 of 4 1.30Up
Head197 74 of 4 0.90None
Eye193 64 of 4 0.93None
Thoracicoabdominal ganglion246 44 of 4 1.20Up
Salivary gland172 34 of 4 0.83Down
Crop240 74 of 4 1.20Up
Midgut158 54 of 4 0.80Down
Tubule148 94 of 4 0.70Down
Hindgut163 74 of 4 0.80Down
Heart104 94 of 4 0.50Down
Fat body112 34 of 4 0.54Down
Ovary340 14 of 4 1.60Up
Testis235 84 of 4 1.10Up
Male accessory glands178 94 of 4 0.90Down
Virgin spermatheca99 44 of 4 0.48Down
Mated spermatheca109 84 of 4 0.52Down
Adult carcass117 74 of 4 0.60Down
Larval CNS576 234 of 4 2.76Up
Larval Salivary gland155 34 of 4 0.74Down
Larval midgut120 64 of 4 0.58Down
Larval tubule242 74 of 4 1.20Up
Larval hindgut167 94 of 4 0.81Down
Larval fat body163 74 of 4 0.80Down
Larval trachea252 124 of 4 1.21Up
Larval carcass175 84 of 4 0.84Down
S2 cells (growing)509 184 of 4 2.44Up
Whole fly208 74 of 4

Looking for CG9045-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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