Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG9091-RA through 18771 annotations produced 1 hits



Ribosomal protein L37a (RpL37a):

Annotation Number : CG9091
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030616
Gbrowse : chrX:15032357-15033423 (-) // 100.0 //
Probeset : 1628061_at
Accessions : protein= NP_573005;, nucleotide= NM_132777;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005840 // ribosome // non-traceable author statemen
Interpro : 0003723 // RNA binding // inferred from electronic annotation /// 0003735 // structural constituent of ribosome // infer
FlyMine data for FBgn0030616.
VDRC has 1 RNAi stocks for FBgn0030616 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2754 764 of 4 0.80None
Head3902 1804 of 4 1.20None
Eye5460 874 of 4 1.66Up
Thoracicoabdominal ganglion3427 634 of 4 1.00None
Salivary gland4812 1104 of 4 1.47Up
Crop4930 2934 of 4 1.50Up
Midgut4028 2234 of 4 1.20Up
Tubule1873 1134 of 4 0.60Down
Hindgut4138 1004 of 4 1.30Up
Heart5695 4434 of 4 1.73Up
Fat body3802 4194 of 4 1.16None
Ovary2741 424 of 4 0.80None
Testis442 284 of 4 0.10Down
Male accessory glands6981 1634 of 4 2.10Up
Virgin spermatheca3040 2814 of 4 0.93None
Mated spermatheca3140 2114 of 4 0.96None
Adult carcass4151 934 of 4 1.30Up
Larval CNS1999 2154 of 4 0.61Down
Larval Salivary gland6219 3194 of 4 1.89Up
Larval midgut3075 754 of 4 0.94None
Larval tubule3272 1214 of 4 1.00None
Larval hindgut3068 374 of 4 0.93None
Larval fat body6496 6994 of 4 2.00Up
Larval trachea5462 1734 of 4 1.66Up
Larval carcass3635 2804 of 4 1.11None
S2 cells (growing)3572 984 of 4 1.09None
Whole fly3284 1844 of 4

Looking for CG9091-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime