Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG9119-RA through 18771 annotations produced 1 hits



(CG9119):

Annotation Number : CG9119
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035189
Gbrowse : chr3L:1203305-1204792 (-) // 100.0 //
Probeset : 1625265_at
Accessions : protein= NP_612081;, nucleotide= NM_138237;
Pathway : 0005634 // nucleus // inferred from electronic annotation
Interpro : "0008270 // zinc ion binding // inferred from electronic annotation /// 0016788 // hydrolase activity
FlyMine data for FBgn0035189.
BDGP gene expression has embryonic in situ data for CG9119: 34 pix of staining in 6 body parts.
VDRC has 2 RNAi stocks for FBgn0035189 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain75 44 of 4 0.20Down
Head345 364 of 4 1.10None
Eye137 404 of 4 0.44Down
Thoracicoabdominal ganglion89 54 of 4 0.30Down
Salivary gland299 54 of 4 0.96None
Crop99 64 of 4 0.30Down
Midgut1154 1004 of 4 3.70Up
Tubule5272 3804 of 416.90Up
Hindgut171 54 of 4 0.60Down
Heart903 994 of 4 2.90Up
Fat body1059 1784 of 4 3.40Up
Ovary15 14 of 4 0.10Down
Testis6 11 of 4 0.00Down
Male accessory glands43 14 of 4 0.10Down
Virgin spermatheca2317 904 of 4 7.44Up
Mated spermatheca1308 1434 of 4 4.20Up
Adult carcass718 314 of 4 2.30Up
Larval CNS29 64 of 4 0.09Down
Larval Salivary gland159 224 of 4 0.51Down
Larval midgut509 584 of 4 1.64Up
Larval tubule780 534 of 4 2.50Up
Larval hindgut216 84 of 4 0.69Down
Larval fat body191 364 of 4 0.60Down
Larval trachea124 214 of 4 0.40Down
Larval carcass190 224 of 4 0.61Down
S2 cells (growing)18 04 of 4 0.06Down
Whole fly311 174 of 4

Looking for CG9119-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime