Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG9186-RB through 18771 annotations produced 1 hits



(CG9186):

Annotation Number : CG9186
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035206
Gbrowse : chr3L:1311718-1313377 (-) // 100.0 //
Probeset : 1637620_s_at
Accessions : protein= NP_612097; /// NP_728590;, nucleotide= NM_138253; /// NM_167867;
Pathway : 0005811 // lipid particle // inferred from direct assay
FlyMine data for FBgn0035206.
BDGP gene expression has embryonic in situ data for CG9186: 14 pix of staining in 3 body parts.
TRiP has 1 RNAi stocks for FBgn0035206 available for purchase.
VDRC has 1 RNAi stocks for FBgn0035206 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain202 ± 34 of 4 0.90Down
Head280 ± 114 of 4 1.20Up
Eye365 ± 274 of 4 1.55Up
Thoracicoabdominal ganglion178 ± 24 of 4 0.80Down
Salivary gland810 ± 144 of 4 3.43Up
Crop424 ± 74 of 4 1.80Up
Midgut361 ± 124 of 4 1.50Up
Tubule627 ± 414 of 4 2.70Up
Hindgut366 ± 84 of 4 1.60Up
Heart266 ± 84 of 4 1.13Up
Fat body464 ± 714 of 4 1.97Up
Ovary341 ± 54 of 4 1.40Up
Testis83 ± 34 of 4 0.40Down
Male accessory glands862 ± 154 of 4 3.70Up
Virgin spermatheca458 ± 94 of 4 1.94Up
Mated spermatheca418 ± 344 of 4 1.77Up
Adult carcass302 ± 44 of 4 1.30Up
Larval CNS257 ± 74 of 4 1.09Up
Larval Salivary gland1510 ± 2244 of 4 6.40Up
Larval midgut539 ± 204 of 4 2.28Up
Larval tubule345 ± 54 of 4 1.50Up
Larval hindgut369 ± 44 of 4 1.57Up
Larval fat body924 ± 1044 of 4 3.90Up
Larval trachea497 ± 674 of 4 2.11Up
Larval carcass842 ± 184 of 4 3.57Up
S2 cells (growing)197 ± 34 of 4 0.84Down
Whole fly236 ± 24 of 4

Looking for CG9186-RB. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime