FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9277-RB through 18771 annotations produced 1 hits

beta-Tubulin (betaTub56D):

Annotation Number : CG9277
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003887
Gbrowse : chr2R:15334823-15339122 (-) // 100.0 //
Probeset : 1636530_s_at
Accessions : protein= NP_523795; /// NP_725895; /// NP_725896; /// NP_725897;, nucleotide= NM_079071; /// NM_166355; /// NM_166356; /// NM_166357;
Pathway : 0005874 // microtubule // inferred from direct assay /// 0005874 // microtubule // inferred from sequence or structural
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // inferred from ele
FlyMine data for FBgn0003887.
BDGP gene expression has embryonic in situ data for betaTub56D: 10 pix of staining in 13 body parts.
Homophila reports that CG9277 is a close match (1e-80) to human gene LIS3;TUBA1A;TUBA3 (NP_006000), a gene associated with Lissencephaly 3, 611603 (3).
BioGrid reports that CG9277 interacts with CG9331 CG9335 CG9665 CG9797 CG9975 .
TRiP has 1 RNAi stocks for FBgn0003887 available for purchase.
VDRC has 2 RNAi stocks for FBgn0003887 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1574 ± 24	4 of 4	0.90	None
Head	1162 ± 45	4 of 4	0.70	Down
Eye	787 ± 64	4 of 4	0.45	Down
Thoracicoabdominal ganglion	2611 ± 69	4 of 4	1.50	Up
Salivary gland	849 ± 51	4 of 4	0.49	Down
Crop	2295 ± 41	4 of 4	1.30	Up
Midgut	1116 ± 41	4 of 4	0.60	Down
Tubule	622 ± 84	4 of 4	0.40	Down
Hindgut	1870 ± 38	4 of 4	1.10	Up
Heart	753 ± 23	4 of 4	0.44	Down
Fat body	822 ± 105	4 of 4	0.47	Down
Ovary	2174 ± 21	4 of 4	1.30	Up
Testis	518 ± 18	4 of 4	0.30	Down
Male accessory glands	1233 ± 50	4 of 4	0.70	Down
Virgin spermatheca	1197 ± 18	4 of 4	0.69	Down
Mated spermatheca	1682 ± 157	4 of 4	0.97	None
Adult carcass	1125 ± 110	4 of 4	0.60	Down
Larval CNS	2345 ± 117	4 of 4	1.35	Up
Larval Salivary gland	4044 ± 172	4 of 4	2.34	Up
Larval midgut	2312 ± 132	4 of 4	1.34	Up
Larval tubule	1705 ± 27	4 of 4	1.00	None
Larval hindgut	3437 ± 44	4 of 4	1.98	Up
Larval fat body	958 ± 87	4 of 4	0.60	Down
Larval trachea	4703 ± 137	4 of 4	2.72	Up
Larval carcass	3582 ± 226	4 of 4	2.07	Up
S2 cells (growing)	2916 ± 60	4 of 4	1.68	Up
Whole fly	1732 ± 26	4 of 4

Looking for CG9277-RB. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720