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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG9285-RA through 18771 annotations produced 1 hits



Dipeptidase B (Dip-B):

Annotation Number : CG9285
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0000454
Gbrowse : chr3R:9608011-9611401 (+) // 100.0 //
Probeset : 1635449_s_at
Accessions : protein= NP_650318; /// NP_731863; /// NP_731864;, nucleotide= NM_142061; /// NM_169557; /// NM_169558;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0004177 // aminopeptidase activity // inferred from sequence or structural similarity /// 0004177 // aminopeptidase acti
FlyMine data for FBgn0000454.
VDRC has 2 RNAi stocks for FBgn0000454 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain714 274 of 4 0.80None
Head488 254 of 4 0.50Down
Eye239 44 of 4 0.26Down
Thoracicoabdominal ganglion828 314 of 4 0.90None
Salivary gland623 534 of 4 0.67Down
Crop251 124 of 4 0.30Down
Midgut1212 514 of 4 1.30Up
Tubule3175 824 of 4 3.40Up
Hindgut557 154 of 4 0.60Down
Heart1214 604 of 4 1.30Up
Fat body468 394 of 4 0.50Down
Ovary1103 204 of 4 1.20None
Testis610 144 of 4 0.70Down
Male accessory glands331 304 of 4 0.40Down
Virgin spermatheca717 164 of 4 0.77None
Mated spermatheca591 364 of 4 0.64Down
Adult carcass381 414 of 4 0.40Down
Larval CNS436 204 of 4 0.47Down
Larval Salivary gland641 154 of 4 0.69Down
Larval midgut1761 514 of 4 1.89Up
Larval tubule2800 1194 of 4 3.00Up
Larval hindgut1024 514 of 4 1.10None
Larval fat body1411 1464 of 4 1.50Up
Larval trachea664 674 of 4 0.71Down
Larval carcass648 314 of 4 0.70Down
S2 cells (growing)822 74 of 4 0.88None
Whole fly931 714 of 4

Looking for CG9285-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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