FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9320-RA through 18771 annotations produced 1 hits

March 2006 (FlyBase/BDGP 5.3) (chr2L:20752399-20754558 (+) // 100.0 //):

Annotation Number : CG9320
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse :
Probeset : 1641469_at
Accessions : protein= , nucleotide=

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	76 ± 4	4 of 4	1.00	None
Head	76 ± 2	4 of 4	1.00	None
Eye	86 ± 3	4 of 4	1.14	None
Thoracicoabdominal ganglion	75 ± 3	4 of 4	1.00	None
Salivary gland	61 ± 10	1 of 4	0.81	None
Crop	80 ± 2	4 of 4	1.10	None
Midgut	63 ± 4	1 of 4	0.80	None
Tubule	58 ± 3	4 of 4	0.80	Down
Hindgut	81 ± 6	4 of 4	1.10	None
Heart	75 ± 1	4 of 4	1.00	None
Fat body	47 ± 2	4 of 4	0.63	Down
Ovary	107 ± 3	4 of 4	1.40	Up
Testis	91 ± 4	4 of 4	1.20	Up
Male accessory glands	83 ± 3	4 of 4	1.10	None
Virgin spermatheca	34 ± 3	0 of 4	0.46	Down
Mated spermatheca	49 ± 2	3 of 4	0.65	Down
Adult carcass	61 ± 3	2 of 4	0.80	Down
Larval CNS	96 ± 3	4 of 4	1.27	Up
Larval Salivary gland	58 ± 2	4 of 4	0.77	Down
Larval midgut	40 ± 1	0 of 4	0.54	Down
Larval tubule	98 ± 2	4 of 4	1.30	Up
Larval hindgut	48 ± 2	4 of 4	0.63	Down
Larval fat body	66 ± 4	4 of 4	0.90	None
Larval trachea	74 ± 8	4 of 4	0.98	None
Larval carcass	52 ± 4	0 of 4	0.69	Down
S2 cells (growing)	103 ± 2	4 of 4	1.36	Up
Whole fly	76 ± 4	4 of 4

Looking for CG9320-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720