Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG9335-RA through 18771 annotations produced 1 hits



(CG9335):

Annotation Number : CG9335
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032895
Gbrowse : chr2L:20852580-20857113 (+) // 100.0 //
Probeset : 1631491_at
Accessions : protein= NP_610067;, nucleotide= NM_136223;
FlyMine data for FBgn0032895.
BDGP gene expression has embryonic in situ data for CG9335: 16 pix of staining in 5 body parts.
VDRC has 1 RNAi stocks for FBgn0032895 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain84 ± 34 of 4 4.60Up
Head53 ± 24 of 4 2.90Up
Eye57 ± 54 of 4 3.14Up
Thoracicoabdominal ganglion761 ± 424 of 441.20Up
Salivary gland13 ± 50 of 4 0.75None
Crop84 ± 84 of 4 4.60Up
Midgut9 ± 20 of 4 0.50Down
Tubule2 ± 00 of 4 0.20Down
Hindgut12 ± 30 of 4 0.70None
Heart7 ± 11 of 4 0.38Down
Fat body7 ± 30 of 4 0.42Down
Ovary4 ± 10 of 4 0.20Down
Testis25 ± 24 of 4 1.40None
Male accessory glands69 ± 34 of 4 3.70Up
Virgin spermatheca2 ± 00 of 4 0.13Down
Mated spermatheca4 ± 20 of 4 0.26Down
Adult carcass24 ± 50 of 4 1.30None
Larval CNS303 ± 514 of 416.45Up
Larval Salivary gland2 ± 00 of 4 0.12Down
Larval midgut7 ± 10 of 4 0.38Down
Larval tubule3 ± 00 of 4 0.20Down
Larval hindgut18 ± 03 of 4 1.02None
Larval fat body5 ± 20 of 4 0.30Down
Larval trachea5 ± 40 of 4 0.27Down
Larval carcass6 ± 20 of 4 0.33Down
S2 cells (growing)3 ± 10 of 4 0.18Down
Whole fly18 ± 24 of 4

Looking for CG9335-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime