FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9343-RB through 18771 annotations produced 1 hits

/// GAGA factor (CG42507 /// Trl):

Annotation Number : CG9343
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0013263 /// FBgn0260233
Gbrowse : chr3L:14741028-14750430 (-) // 100.0 //
Probeset : 1628275_at
Accessions : protein= NP_001034013; /// NP_001034014; /// NP_001034015; /// NP_001163443; /// NP_001163444; /// NP_996077; /// NP_996078; /// NP_996079; /// NP_996080; /// NP_996081; /// NP_996082;, nucleotide= NM_001038924; /// NM_001038925; /// NM_001038926; /// NM_001169972; /// NM_001169973; /// NM_206355; /// NM_206356; /// NM_206357; /// NM_206358; /// NM_206359; /// NM_206360;
Pathway : via endonucleolytic cleavage and ligation // inferred from electronic annotation /// 0007049 // cell cycle // inferred
Interpro : DNA-dependent // traceable author statement /// 0045893 // positive regulation of transcription
FlyMine data for FBgn0013263 /// FBgn0260233.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	737 ± 8	4 of 4	20.50	Up
Head	158 ± 15	4 of 4	4.40	Up
Eye	118 ± 13	4 of 4	3.29	Up
Thoracicoabdominal ganglion	487 ± 28	4 of 4	13.60	Up
Salivary gland	23 ± 2	2 of 4	0.64	Down
Crop	12 ± 1	4 of 4	0.40	Down
Midgut	20 ± 1	4 of 4	0.60	Down
Tubule	33 ± 5	4 of 4	0.90	None
Hindgut	13 ± 0	4 of 4	0.40	Down
Heart	4 ± 1	0 of 4	0.14	Down
Fat body	9 ± 1	2 of 4	0.26	Down
Ovary	23 ± 0	4 of 4	0.60	Down
Testis	5 ± 1	2 of 4	0.20	Down
Male accessory glands	12 ± 1	2 of 4	0.30	Down
Virgin spermatheca	8 ± 1	1 of 4	0.23	Down
Mated spermatheca	8 ± 1	1 of 4	0.22	Down
Adult carcass	16 ± 1	3 of 4	0.50	Down
Larval CNS	930 ± 195	4 of 4	25.93	Up
Larval Salivary gland	24 ± 3	4 of 4	0.67	Down
Larval midgut	5 ± 0	1 of 4	0.16	Down
Larval tubule	4 ± 1	1 of 4	0.10	Down
Larval hindgut	8 ± 0	2 of 4	0.25	Down
Larval fat body	19 ± 1	4 of 4	0.50	Down
Larval trachea	16 ± 6	4 of 4	0.45	Down
Larval carcass	36 ± 5	4 of 4	1.03	None
S2 cells (growing)	17 ± 1	4 of 4	0.50	Down
Whole fly	35 ± 3	4 of 4

Looking for CG9343-RB. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720