FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9358-RA through 18771 annotations produced 1 hits

Pherokine 3 (Phk-3):

Annotation Number : CG9358
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035089
Gbrowse : chr2R:20858365-20859365 (-) // 100.0 //
Probeset : 1632591_at
Accessions : protein= NP_611990;, nucleotide= NM_138146;
Pathway : embryo // traceable author statement /// 0009617 // response to bacterium // inferred from expression pattern /// 00307
Interpro : 0005737 // cytoplasm // traceable author statement /// 0019897 // extrinsic to plasma membrane // traceable author state
FlyMine data for FBgn0035089.
BDGP gene expression has embryonic in situ data for CG9358: 22 pix of staining in 10 body parts.
TRiP has 1 RNAi stocks for FBgn0035089 available for purchase.
VDRC has 4 RNAi stocks for FBgn0035089 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	11 ± 1	2 of 4	0.10	Down
Head	196 ± 9	4 of 4	1.60	Up
Eye	141 ± 7	4 of 4	1.15	None
Thoracicoabdominal ganglion	6 ± 1	0 of 4	0.10	Down
Salivary gland	16 ± 5	0 of 4	0.13	Down
Crop	690 ± 49	4 of 4	5.60	Up
Midgut	74 ± 14	4 of 4	0.60	None
Tubule	75 ± 43	3 of 4	0.60	None
Hindgut	1461 ± 46	4 of 4	11.90	Up
Heart	54 ± 7	4 of 4	0.45	Down
Fat body	57 ± 6	4 of 4	0.47	None
Ovary	7 ± 1	4 of 4	0.10	Down
Testis	19 ± 0	4 of 4	0.20	Down
Male accessory glands	15 ± 2	2 of 4	0.10	Down
Virgin spermatheca	93 ± 5	4 of 4	0.76	None
Mated spermatheca	96 ± 12	4 of 4	0.78	None
Adult carcass	111 ± 2	4 of 4	0.90	None
Larval CNS	24 ± 12	4 of 4	0.20	Down
Larval Salivary gland	167 ± 12	4 of 4	1.36	None
Larval midgut	191 ± 16	4 of 4	1.55	None
Larval tubule	48 ± 16	4 of 4	0.40	Down
Larval hindgut	1950 ± 100	4 of 4	15.83	Up
Larval fat body	165 ± 14	4 of 4	1.30	None
Larval trachea	4231 ± 182	4 of 4	34.35	Up
Larval carcass	2258 ± 239	4 of 4	18.33	Up
S2 cells (growing)	203 ± 14	4 of 4	1.65	Up
Whole fly	123 ± 22	4 of 4

Looking for CG9358-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720