FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9397-RA through 18771 annotations produced 1 hits

deformed (jing):

Annotation Number : CG9397
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0086655
Gbrowse : chr2R:2390272-2391223 (+) // 100.0 //
Probeset : 1628528_at
Accessions : protein= NP_001097197; /// NP_001097198; /// NP_001097199; /// NP_001097200; /// NP_995749;, nucleotide= NM_001103727; /// NM_001103728; /// NM_001103729; /// NM_001103730; /// NM_206027; /// NM_206027;
Pathway : maxillary segment // inferred from expression pattern /// 0007382 // specification of segmental identity
Interpro : maxillary segment // inferred from genetic interaction /// 0007411 // axon guidance // inferred from mutant phenotype /
FlyMine data for FBgn0086655.
BioGrid reports that CG9397 interacts with CG8355 CG6883 CG7771 CG4354 CG11987 CG32134 .
TRiP has 2 RNAi stocks for FBgn0086655 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	0.80	None
Head	4 ± 1	1 of 4	1.00	None
Eye	3 ± 1	0 of 4	0.81	None
Thoracicoabdominal ganglion	6 ± 0	1 of 4	1.30	None
Salivary gland	13 ± 6	1 of 4	2.79	None
Crop	6 ± 0	2 of 4	1.40	None
Midgut	5 ± 2	0 of 4	1.20	None
Tubule	4 ± 0	0 of 4	0.90	None
Hindgut	6 ± 1	1 of 4	1.40	None
Heart	7 ± 1	1 of 4	1.46	None
Fat body	7 ± 5	3 of 4	1.54	None
Ovary	4 ± 1	0 of 4	0.90	None
Testis	2 ± 0	0 of 4	0.60	None
Male accessory glands	7 ± 0	1 of 4	1.60	None
Virgin spermatheca	7 ± 1	0 of 4	1.60	None
Mated spermatheca	4 ± 1	1 of 4	0.99	None
Adult carcass	10 ± 3	1 of 4	2.20	None
Larval CNS	3 ± 1	1 of 4	0.73	None
Larval Salivary gland	9 ± 1	1 of 4	1.96	Up
Larval midgut	3 ± 1	0 of 4	0.78	None
Larval tubule	6 ± 0	1 of 4	1.40	None
Larval hindgut	3 ± 1	0 of 4	0.70	None
Larval fat body	13 ± 3	1 of 4	2.80	None
Larval trachea	5 ± 2	1 of 4	1.23	None
Larval carcass	5 ± 0	1 of 4	1.20	None
S2 cells (growing)	5 ± 0	1 of 4	1.14	None
Whole fly	4 ± 1	0 of 4

Looking for CG9397-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720