FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9398-RA through 18771 annotations produced 1 hits

Tubby-like (king-tubby):

Annotation Number : CG9398
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0015721
Gbrowse : chr2R:17009001-17011220 (+) // 100.0 //
Probeset : 1639525_at
Accessions : protein= NP_611549; /// NP_995911;, nucleotide= NM_137705; /// NM_206189;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // inferred from electronic annotation /// 00057
FlyMine data for FBgn0015721.
Homophila reports that CG9398 is a close match (8e-88) to human gene RP14;TULP1 (NP_003313), a gene associated with Retinitis pigmentosa-14, 600132 (3).
BioGrid reports that CG9398 interacts with CG9797 .
VDRC has 2 RNAi stocks for FBgn0015721 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	83 ± 5	4 of 4	6.40	Up
Head	25 ± 1	4 of 4	1.90	Up
Eye	8 ± 3	1 of 4	0.67	None
Thoracicoabdominal ganglion	49 ± 1	4 of 4	3.80	Up
Salivary gland	6 ± 2	0 of 4	0.53	None
Crop	5 ± 1	0 of 4	0.40	Down
Midgut	20 ± 2	3 of 4	1.50	Up
Tubule	6 ± 0	0 of 4	0.50	Down
Hindgut	6 ± 2	0 of 4	0.50	None
Heart	4 ± 1	0 of 4	0.36	Down
Fat body	9 ± 5	0 of 4	0.69	None
Ovary	3 ± 1	0 of 4	0.30	Down
Testis	48 ± 4	4 of 4	3.70	Up
Male accessory glands	56 ± 4	4 of 4	4.30	Up
Virgin spermatheca	8 ± 2	0 of 4	0.66	None
Mated spermatheca	9 ± 2	1 of 4	0.74	None
Adult carcass	11 ± 3	0 of 4	0.80	None
Larval CNS	79 ± 11	4 of 4	6.04	Up
Larval Salivary gland	3 ± 1	0 of 4	0.28	Down
Larval midgut	13 ± 1	0 of 4	1.02	None
Larval tubule	6 ± 0	0 of 4	0.50	Down
Larval hindgut	6 ± 0	1 of 4	0.50	Down
Larval fat body	16 ± 4	2 of 4	1.30	None
Larval trachea	5 ± 2	1 of 4	0.39	Down
Larval carcass	8 ± 1	1 of 4	0.62	Down
S2 cells (growing)	1 ± 0	0 of 4	0.09	Down
Whole fly	13 ± 1	3 of 4

Looking for CG9398-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720