Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG9451-RA through 18771 annotations produced 1 hits



(CG9451):

Annotation Number : CG9451
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036876
Gbrowse : chr3L:19491483-19493912 (-) // 100.0 //
Probeset : 1636526_at
Accessions : protein= NP_649118;, nucleotide= NM_140861;
Interpro : 0003993 // acid phosphatase activity // inferred from sequence or structural similarity /// 0003993 // acid phosphatase
FlyMine data for FBgn0036876.
BDGP gene expression has embryonic in situ data for CG9451: 9 pix of staining in 3 body parts.
TRiP has 1 RNAi stocks for FBgn0036876 available for purchase.
VDRC has 2 RNAi stocks for FBgn0036876 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain33 ± 13 of 4 0.40Down
Head306 ± 394 of 4 3.40Up
Eye339 ± 874 of 4 3.72None
Thoracicoabdominal ganglion43 ± 04 of 4 0.50Down
Salivary gland120 ± 253 of 4 1.31None
Crop16 ± 40 of 4 0.20Down
Midgut4 ± 10 of 4 0.00Down
Tubule290 ± 514 of 4 3.20Up
Hindgut173 ± 174 of 4 1.90Up
Heart715 ± 494 of 4 7.84Up
Fat body1482 ± 974 of 416.23Up
Ovary1 ± 00 of 4 0.00Down
Testis100 ± 64 of 4 1.10None
Male accessory glands4 ± 20 of 4 0.10Down
Virgin spermatheca948 ± 1074 of 410.39Up
Mated spermatheca966 ± 1484 of 410.58Up
Adult carcass508 ± 554 of 4 5.60Up
Larval CNS127 ± 204 of 4 1.40Up
Larval Salivary gland1050 ± 504 of 411.51Up
Larval midgut2 ± 10 of 4 0.03Down
Larval tubule387 ± 404 of 4 4.20Up
Larval hindgut108 ± 34 of 4 1.19Up
Larval fat body18 ± 80 of 4 0.20Down
Larval trachea54 ± 44 of 4 0.59Down
Larval carcass103 ± 104 of 4 1.13None
S2 cells (growing)2 ± 00 of 4 0.03Down
Whole fly91 ± 44 of 4

Looking for CG9451-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime