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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG9481-RA through 18771 annotations produced 1 hits



UDP-glycosyltransferase 37b1 (Ugt37b1):

Annotation Number : CG9481
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026755
Gbrowse : chr2L:6225049-6226842 (+) // 100.0 //
Probeset : 1640109_at
Accessions : protein= NP_525008;, nucleotide= NM_080269;
Interpro : "0015020 // glucuronosyltransferase activity // inferred from sequence or structural similarity /// 0015020 // glucurono
FlyMine data for FBgn0026755.
Homophila reports that CG9481 is a close match (8e-43) to human gene GNT1;UGT1;UGT1A1 (NP_000454), a gene associated with Crigler-Najjar syndrome, type I, 218800 (3);Crigler-Najjar syndrome, type II, 606785 (3);Hyperbilirubinemia, familial transcient neonatal, 237900 (3);[Gilbert syndrome], 143500 (3).
VDRC has 3 RNAi stocks for FBgn0026755 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.20Down
Head13 ± 44 of 4 1.40None
Eye9 ± 11 of 4 1.01None
Thoracicoabdominal ganglion1 ± 00 of 4 0.10Down
Salivary gland16 ± 41 of 4 1.68None
Crop2 ± 00 of 4 0.20Down
Midgut220 ± 114 of 422.80Up
Tubule65 ± 124 of 4 6.80Up
Hindgut11 ± 22 of 4 1.20None
Heart10 ± 23 of 4 1.09None
Fat body15 ± 33 of 4 1.55Up
Ovary0 ± 00 of 4 0.10Down
Testis2 ± 10 of 4 0.20Down
Male accessory glands4 ± 10 of 4 0.40Down
Virgin spermatheca3 ± 10 of 4 0.33Down
Mated spermatheca1 ± 00 of 4 0.18Down
Adult carcass13 ± 62 of 4 1.30None
Larval CNS1 ± 10 of 4 0.18Down
Larval Salivary gland2 ± 00 of 4 0.20Down
Larval midgut34 ± 34 of 4 3.61Up
Larval tubule41 ± 54 of 4 4.20Up
Larval hindgut11 ± 23 of 4 1.15None
Larval fat body4 ± 10 of 4 0.50None
Larval trachea0 ± 00 of 4 0.09Down
Larval carcass0 ± 00 of 4 0.09Down
S2 cells (growing)0 ± 00 of 4 0.10Down
Whole fly9 ± 04 of 4

Looking for CG9481-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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