FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9543-RA through 18771 annotations produced 1 hits

epsilonCOP (epsilonCOP):

Annotation Number : CG9543
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027496
Gbrowse : chr2L:6489091-6490195 (+) // 100.0 //
Probeset : 1633785_at
Accessions : protein= NP_609037;, nucleotide= NM_135193;
Pathway : Golgi to ER // inferred from sequence or structural similarity /// 0006890 // retrograde vesicle-mediated transport
Interpro : Golgi to ER // inferred from electronic annotation"
FlyMine data for FBgn0027496.
BDGP gene expression has embryonic in situ data for BcDNA:LD29885: 10 pix of staining in 5 body parts.
TRiP has 1 RNAi stocks for FBgn0027496 available for purchase.
VDRC has 2 RNAi stocks for FBgn0027496 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	233 ± 7	4 of 4	0.70	Down
Head	307 ± 7	4 of 4	0.90	Down
Eye	458 ± 13	4 of 4	1.37	Up
Thoracicoabdominal ganglion	302 ± 9	4 of 4	0.90	Down
Salivary gland	1812 ± 97	4 of 4	5.40	Up
Crop	373 ± 14	4 of 4	1.10	None
Midgut	489 ± 9	4 of 4	1.50	Up
Tubule	281 ± 20	4 of 4	0.80	Down
Hindgut	363 ± 5	4 of 4	1.10	Up
Heart	399 ± 13	4 of 4	1.19	Up
Fat body	346 ± 23	4 of 4	1.03	None
Ovary	367 ± 10	4 of 4	1.10	Up
Testis	348 ± 12	4 of 4	1.00	None
Male accessory glands	1831 ± 119	4 of 4	5.50	Up
Virgin spermatheca	452 ± 19	4 of 4	1.35	Up
Mated spermatheca	592 ± 42	4 of 4	1.76	Up
Adult carcass	289 ± 13	4 of 4	0.90	Down
Larval CNS	369 ± 20	4 of 4	1.10	Up
Larval Salivary gland	2435 ± 186	4 of 4	7.26	Up
Larval midgut	474 ± 13	4 of 4	1.41	Up
Larval tubule	532 ± 11	4 of 4	1.60	Up
Larval hindgut	476 ± 3	4 of 4	1.42	Up
Larval fat body	387 ± 40	4 of 4	1.20	None
Larval trachea	569 ± 83	4 of 4	1.70	Up
Larval carcass	439 ± 18	4 of 4	1.31	Up
S2 cells (growing)	642 ± 9	4 of 4	1.91	Up
Whole fly	335 ± 3	4 of 4

Looking for CG9543-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720