FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9548-RA through 18771 annotations produced 1 hits

(CG9548):

Annotation Number : CG9548
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031822
Gbrowse : chr2L:6490187-6490828 (-) // 100.0 //
Probeset : 1634320_at
Accessions : protein= NP_609038;, nucleotide= NM_135194;
Pathway : via spliceosome // inferred by curator"
Interpro : 0071011 // precatalytic spliceosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferre
FlyMine data for FBgn0031822.
BDGP gene expression has embryonic in situ data for CG9548: 4 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0031822 available for purchase.
VDRC has 3 RNAi stocks for FBgn0031822 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	108 ± 3	4 of 4	0.30	Down
Head	107 ± 8	4 of 4	0.30	Down
Eye	167 ± 4	4 of 4	0.52	Down
Thoracicoabdominal ganglion	98 ± 3	4 of 4	0.30	Down
Salivary gland	88 ± 8	4 of 4	0.27	Down
Crop	152 ± 8	4 of 4	0.50	Down
Midgut	179 ± 7	4 of 4	0.60	Down
Tubule	160 ± 10	4 of 4	0.50	Down
Hindgut	133 ± 7	4 of 4	0.40	Down
Heart	134 ± 5	4 of 4	0.42	Down
Fat body	121 ± 13	4 of 4	0.38	Down
Ovary	610 ± 19	4 of 4	1.90	Up
Testis	272 ± 10	4 of 4	0.80	None
Male accessory glands	135 ± 4	4 of 4	0.40	Down
Virgin spermatheca	111 ± 8	4 of 4	0.35	Down
Mated spermatheca	107 ± 11	4 of 4	0.33	Down
Adult carcass	112 ± 9	4 of 4	0.30	Down
Larval CNS	615 ± 19	4 of 4	1.91	Up
Larval Salivary gland	334 ± 9	4 of 4	1.04	None
Larval midgut	128 ± 6	4 of 4	0.40	Down
Larval tubule	170 ± 6	4 of 4	0.50	Down
Larval hindgut	175 ± 9	4 of 4	0.54	Down
Larval fat body	166 ± 6	4 of 4	0.50	Down
Larval trachea	274 ± 12	4 of 4	0.85	None
Larval carcass	245 ± 18	4 of 4	0.76	Down
S2 cells (growing)	352 ± 13	4 of 4	1.09	None
Whole fly	322 ± 24	4 of 4

Looking for CG9548-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720