FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9576-RA through 18771 annotations produced 1 hits

(CG9576):

Annotation Number : CG9576
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031091
Gbrowse : chrX:20054385-20056763 (-) // 100.0 //
Probeset : 1639608_at
Accessions : protein= NP_608374;, nucleotide= NM_134530;
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from elect
FlyMine data for FBgn0031091.
BDGP gene expression has embryonic in situ data for CG9576: 10 pix of staining in 3 body parts.
TRiP has 1 RNAi stocks for FBgn0031091 available for purchase.
VDRC has 3 RNAi stocks for FBgn0031091 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	11 ± 1	3 of 4	0.00	Down
Head	10 ± 0	2 of 4	0.00	Down
Eye	4 ± 1	0 of 4	0.02	Down
Thoracicoabdominal ganglion	21 ± 2	4 of 4	0.10	Down
Salivary gland	10 ± 0	0 of 4	0.04	Down
Crop	14 ± 2	2 of 4	0.10	Down
Midgut	17 ± 1	2 of 4	0.10	Down
Tubule	10 ± 1	0 of 4	0.00	Down
Hindgut	11 ± 2	1 of 4	0.00	Down
Heart	18 ± 2	4 of 4	0.07	Down
Fat body	18 ± 5	2 of 4	0.07	Down
Ovary	904 ± 4	4 of 4	3.40	Up
Testis	81 ± 1	4 of 4	0.30	Down
Male accessory glands	15 ± 0	0 of 4	0.10	Down
Virgin spermatheca	20 ± 0	4 of 4	0.08	Down
Mated spermatheca	15 ± 1	2 of 4	0.06	Down
Adult carcass	7 ± 2	0 of 4	0.00	Down
Larval CNS	191 ± 2	4 of 4	0.72	Down
Larval Salivary gland	63 ± 1	4 of 4	0.24	Down
Larval midgut	27 ± 2	4 of 4	0.10	Down
Larval tubule	14 ± 1	2 of 4	0.10	Down
Larval hindgut	38 ± 2	4 of 4	0.14	Down
Larval fat body	75 ± 6	4 of 4	0.30	Down
Larval trachea	125 ± 8	4 of 4	0.47	Down
Larval carcass	56 ± 2	4 of 4	0.21	Down
S2 cells (growing)	171 ± 7	4 of 4	0.64	Down
Whole fly	267 ± 4	4 of 4

Looking for CG9576-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720