FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9623-RB through 18771 annotations produced 1 hits

alphaPS2 integrin (if):

Annotation Number : CG9623
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001250
Gbrowse : chrX:16646221-16677467 (-) // 100.0 //
Probeset : 1632744_a_at
Accessions : protein= NP_001162777; /// NP_001162778; /// NP_523378; /// NP_728021;, nucleotide= NM_001169306; /// NM_001169307; /// NM_078654; /// NM_167544;
Pathway : open tracheal system // traceable author statement /// 0007427 // epithelial cell migration
Interpro : open tracheal system // traceable author statement /// 0007431 // salivary gland development // traceable author statem
FlyMine data for FBgn0001250.
Homophila reports that CG9623 is a close match (9e-32) to human gene CD11B;CR3A;ITGAM;MAC1A;SLEB6 (NP_000623), a gene associated with {Systemic lupus erythematous, association with susceptibility to, 6}, 609939 (3).
BioGrid reports that CG9623 interacts with CG3954 CG1765 CG15793 CG2746 CG3411 CG3411 CG14938 CG10293 CG1771 CG1771 CG1771 CG1771 CG1771 CG1771 CG1771 CG1771 CG1771 CG1771 CG1771 CG1771 CG1771 CG1771 CG1771 CG1771 CG7935 CG1560 CG1560 CG1560 CG1560 CG1560 CG1560 CG1560 CG1560 CG1560 CG1560 CG2845 CG4444 CG8355 .
TRiP has 2 RNAi stocks for FBgn0001250 available for purchase.
VDRC has 3 RNAi stocks for FBgn0001250 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	78 ± 3	4 of 4	0.60	Down
Head	204 ± 5	4 of 4	1.60	Up
Eye	68 ± 4	4 of 4	0.53	Down
Thoracicoabdominal ganglion	117 ± 6	4 of 4	0.90	None
Salivary gland	183 ± 8	4 of 4	1.42	Up
Crop	925 ± 44	4 of 4	7.10	Up
Midgut	87 ± 13	4 of 4	0.70	Down
Tubule	300 ± 13	4 of 4	2.30	Up
Hindgut	579 ± 9	4 of 4	4.50	Up
Heart	255 ± 24	4 of 4	1.97	Up
Fat body	160 ± 18	4 of 4	1.24	None
Ovary	21 ± 2	4 of 4	0.20	Down
Testis	34 ± 1	4 of 4	0.30	Down
Male accessory glands	96 ± 12	4 of 4	0.70	None
Virgin spermatheca	234 ± 24	4 of 4	1.81	Up
Mated spermatheca	193 ± 13	4 of 4	1.49	Up
Adult carcass	280 ± 6	4 of 4	2.20	Up
Larval CNS	145 ± 12	4 of 4	1.12	None
Larval Salivary gland	493 ± 20	4 of 4	3.80	Up
Larval midgut	85 ± 7	4 of 4	0.66	Down
Larval tubule	1185 ± 39	4 of 4	9.10	Up
Larval hindgut	554 ± 19	4 of 4	4.28	Up
Larval fat body	23 ± 3	2 of 4	0.20	Down
Larval trachea	349 ± 14	4 of 4	2.70	Up
Larval carcass	991 ± 95	4 of 4	7.65	Up
S2 cells (growing)	6 ± 0	1 of 4	0.05	Down
Whole fly	129 ± 9	4 of 4

Looking for CG9623-RB. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720