Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG9652-RA through 18771 annotations produced 1 hits



dopamine D1 receptor (DopR):

Annotation Number : CG9652
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011582
Gbrowse : chr3R:10003004-10040409 (-) // 100.0 //
Probeset : 1629142_at
Accessions : protein= NP_001163607; /// NP_477007;, nucleotide= NM_001170136; /// NM_057659;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // not reco
Interpro : "0001588 // dopamine receptor activity
FlyMine data for FBgn0011582.
Homophila reports that CG9652 is a close match (9e-11) to human gene GHSR (NP_004113), a gene associated with Short stature, 604271 (3).
TRiP has 2 RNAi stocks for FBgn0011582 available for purchase.
VDRC has 1 RNAi stocks for FBgn0011582 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain163 ± 94 of 4123.20Up
Head10 ± 13 of 4 7.80Up
Eye25 ± 34 of 419.19Up
Thoracicoabdominal ganglion53 ± 44 of 440.70Up
Salivary gland11 ± 20 of 4 8.98Up
Crop4 ± 11 of 4 3.40None
Midgut2 ± 00 of 4 1.50None
Tubule4 ± 00 of 4 3.60Up
Hindgut2 ± 00 of 4 2.10None
Heart1 ± 11 of 4 1.42None
Fat body6 ± 62 of 4 5.08None
Ovary1 ± 01 of 4 1.10None
Testis3 ± 00 of 4 3.00Up
Male accessory glands3 ± 10 of 4 2.70None
Virgin spermatheca10 ± 03 of 4 7.55Up
Mated spermatheca12 ± 24 of 4 9.55Up
Adult carcass2 ± 10 of 4 2.20None
Larval CNS36 ± 104 of 427.57Up
Larval Salivary gland5 ± 11 of 4 3.85None
Larval midgut1 ± 00 of 4 0.91None
Larval tubule3 ± 10 of 4 2.80None
Larval hindgut1 ± 00 of 4 1.02None
Larval fat body4 ± 10 of 4 3.60None
Larval trachea4 ± 30 of 4 3.55None
Larval carcass2 ± 00 of 4 1.72None
S2 cells (growing)1 ± 00 of 4 1.00None
Whole fly1 ± 00 of 4

Looking for CG9652-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime