FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9654-RA through 18771 annotations produced 1 hits

Testis specific RRM protein (Rbp4):

Annotation Number : CG9654
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010258
Gbrowse : chr3R:9480274-9482116 (-) // 100.0 //
Probeset : 1637121_at
Accessions : protein= NP_476935;, nucleotide= NM_057587;
Pathway : 0005737 // cytoplasm // inferred from direct assay
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0010258.
BioGrid reports that CG9654 interacts with CG9975 CG9745 .
VDRC has 1 RNAi stocks for FBgn0010258 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	4 ± 1	0 of 4	0.10	Down
Head	3 ± 1	0 of 4	0.10	Down
Eye	4 ± 0	0 of 4	0.12	Down
Thoracicoabdominal ganglion	2 ± 0	0 of 4	0.10	Down
Salivary gland	38 ± 3	1 of 4	1.11	None
Crop	14 ± 2	1 of 4	0.40	Down
Midgut	9 ± 2	0 of 4	0.30	Down
Tubule	11 ± 1	0 of 4	0.30	Down
Hindgut	7 ± 1	0 of 4	0.20	Down
Heart	6 ± 1	0 of 4	0.18	Down
Fat body	14 ± 4	0 of 4	0.40	Down
Ovary	1 ± 0	0 of 4	0.00	Down
Testis	277 ± 4	4 of 4	8.00	Up
Male accessory glands	23 ± 5	0 of 4	0.70	None
Virgin spermatheca	11 ± 1	0 of 4	0.34	Down
Mated spermatheca	13 ± 1	0 of 4	0.37	Down
Adult carcass	6 ± 2	0 of 4	0.20	Down
Larval CNS	11 ± 4	0 of 4	0.34	Down
Larval Salivary gland	24 ± 4	3 of 4	0.69	None
Larval midgut	6 ± 1	0 of 4	0.19	Down
Larval tubule	40 ± 3	4 of 4	1.20	None
Larval hindgut	6 ± 2	0 of 4	0.20	Down
Larval fat body	103 ± 21	4 of 4	3.00	None
Larval trachea	9 ± 1	0 of 4	0.26	Down
Larval carcass	4 ± 1	0 of 4	0.13	Down
S2 cells (growing)	8 ± 1	0 of 4	0.23	Down
Whole fly	34 ± 1	4 of 4

Looking for CG9654-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720