FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9696-RD through 18771 annotations produced 1 hits

domino (dom):

Annotation Number : CG9696
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020306
Gbrowse : chr2R:17210948-17229346 (+) // 100.0 //
Probeset : 1628160_a_at
Accessions : protein= NP_001163237; /// NP_524833; /// NP_726065; /// NP_788424;, nucleotide= NM_001169766; /// NM_080094; /// NM_166446; /// NM_176244;
Pathway : via spliceosome // inferred from mutant phenotype /// 0002165 // instar larval or pupal development // inferred from mu
Interpro : 0005634 // nucleus // inferred by curator /// 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus //
FlyMine data for FBgn0020306.
Homophila reports that CG9696 is a close match (2e-13) to human gene HARP;SIOD;SMARCAL1 (NP_054859), a gene associated with Schimke immunoosseous dysplasia, 242900 (3).
BioGrid reports that CG9696 interacts with CG5942 CG6502 CG32443 CG8651 CG18412 CG8887 CG12058 .
TRiP has 6 RNAi stocks for FBgn0020306 available for purchase.
VDRC has 2 RNAi stocks for FBgn0020306 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	116 ± 2	4 of 4	1.20	Up
Head	64 ± 3	4 of 4	0.70	Down
Eye	89 ± 6	4 of 4	0.93	None
Thoracicoabdominal ganglion	84 ± 2	4 of 4	0.90	Down
Salivary gland	163 ± 30	4 of 4	1.69	None
Crop	78 ± 3	4 of 4	0.80	Down
Midgut	112 ± 3	4 of 4	1.20	Up
Tubule	97 ± 2	4 of 4	1.00	None
Hindgut	91 ± 5	4 of 4	0.90	None
Heart	89 ± 2	4 of 4	0.93	None
Fat body	118 ± 3	4 of 4	1.23	Up
Ovary	243 ± 6	4 of 4	2.50	Up
Testis	40 ± 3	4 of 4	0.40	Down
Male accessory glands	210 ± 13	4 of 4	2.20	Up
Virgin spermatheca	122 ± 2	4 of 4	1.27	Up
Mated spermatheca	160 ± 18	4 of 4	1.66	Up
Adult carcass	79 ± 7	4 of 4	0.80	None
Larval CNS	275 ± 17	4 of 4	2.86	Up
Larval Salivary gland	258 ± 6	4 of 4	2.68	Up
Larval midgut	140 ± 2	4 of 4	1.45	Up
Larval tubule	137 ± 2	4 of 4	1.40	Up
Larval hindgut	151 ± 12	4 of 4	1.57	Up
Larval fat body	62 ± 2	4 of 4	0.70	Down
Larval trachea	169 ± 18	4 of 4	1.76	Up
Larval carcass	163 ± 11	4 of 4	1.70	Up
S2 cells (growing)	83 ± 5	4 of 4	0.87	None
Whole fly	96 ± 3	4 of 4

Looking for CG9696-RD. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720