FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9699-RA through 18771 annotations produced 1 hits

Septin 4 (Sep-04):

Annotation Number : CG9699
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0259923
Gbrowse : chrX:16578243-16589206 (-) // 100.0 //
Probeset : 1630075_s_at
Accessions : protein= NP_573147; /// NP_728003; /// NP_728004; /// NP_728005; /// NP_728006; /// NP_728007; /// NP_996489;, nucleotide= NM_132919; /// NM_167530; /// NM_167531; /// NM_167532; /// NM_167533; /// NM_167534; /// NM_206766;
Pathway : 0005940 // septin ring // inferred from sequence or structural similarity /// 0031105 // septin complex // inferred from
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003924 // GTPase activity // non-traceable aut
FlyMine data for FBgn0259923.
Homophila reports that CG9699 is a close match (5e-75) to human gene MSF;MSF1;NAPB;SEPT9 (NP_006631), a gene associated with Amyotrophy, hereditary neuralgic, 162100 (3);Leukemia, acute myeloid, therapy-related (1);Ovarian carcinoma (1).
TRiP has 2 RNAi stocks for FBgn0259923 available for purchase.
VDRC has 2 RNAi stocks for FBgn0259923 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1009 ± 20	4 of 4	7.80	Up
Head	272 ± 27	4 of 4	2.10	Up
Eye	62 ± 3	4 of 4	0.49	Down
Thoracicoabdominal ganglion	618 ± 18	4 of 4	4.80	Up
Salivary gland	41 ± 2	4 of 4	0.33	Down
Crop	61 ± 6	4 of 4	0.50	Down
Midgut	139 ± 6	4 of 4	1.10	None
Tubule	124 ± 6	4 of 4	1.00	None
Hindgut	69 ± 2	4 of 4	0.50	Down
Heart	114 ± 12	4 of 4	0.89	None
Fat body	35 ± 5	4 of 4	0.27	Down
Ovary	281 ± 21	4 of 4	2.20	Up
Testis	5 ± 0	3 of 4	0.00	Down
Male accessory glands	187 ± 8	4 of 4	1.50	Up
Virgin spermatheca	44 ± 4	4 of 4	0.34	Down
Mated spermatheca	23 ± 2	4 of 4	0.18	Down
Adult carcass	49 ± 6	4 of 4	0.40	Down
Larval CNS	496 ± 90	4 of 4	3.85	Up
Larval Salivary gland	6 ± 1	0 of 4	0.05	Down
Larval midgut	117 ± 13	4 of 4	0.91	None
Larval tubule	614 ± 55	4 of 4	4.80	Up
Larval hindgut	38 ± 2	4 of 4	0.29	Down
Larval fat body	31 ± 6	4 of 4	0.20	Down
Larval trachea	3 ± 2	0 of 4	0.03	Down
Larval carcass	20 ± 4	4 of 4	0.16	Down
S2 cells (growing)	18 ± 2	4 of 4	0.15	Down
Whole fly	128 ± 10	4 of 4

Looking for CG9699-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720