FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9738-RA through 18771 annotations produced 1 hits

JNK kinase 2 (Mkk4):

Annotation Number : CG9738
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024326
Gbrowse : chr3R:4473286-4476516 (-) // 100.0 //
Probeset : 1630916_at
Accessions : protein= NP_001163551; /// NP_477353;, nucleotide= NM_001170080; /// NM_058005;
Pathway : 0030424 // axon // inferred from direct assay
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0024326.
BDGP gene expression has embryonic in situ data for Mkk4: 12 pix of staining in 18 body parts.
Homophila reports that CG9738 is a close match (7e-11) to human gene AGMX1;AT;BTK;IMD1;XLA (NP_000052), a gene associated with Agammaglobulinemia, type 1, X-linked (3);XLA and isolated growth hormone deficiency, 307200 (3).
TRiP has 1 RNAi stocks for FBgn0024326 available for purchase.
VDRC has 3 RNAi stocks for FBgn0024326 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	540 ± 40	4 of 4	4.30	Up
Head	313 ± 29	4 of 4	2.50	Up
Eye	455 ± 42	4 of 4	3.64	Up
Thoracicoabdominal ganglion	896 ± 32	4 of 4	7.20	Up
Salivary gland	249 ± 15	4 of 4	1.99	Up
Crop	202 ± 12	4 of 4	1.60	Up
Midgut	265 ± 7	4 of 4	2.10	Up
Tubule	253 ± 16	4 of 4	2.00	Up
Hindgut	232 ± 3	4 of 4	1.90	Up
Heart	262 ± 20	4 of 4	2.10	Up
Fat body	240 ± 15	4 of 4	1.92	Up
Ovary	76 ± 4	4 of 4	0.60	Down
Testis	24 ± 2	4 of 4	0.20	Down
Male accessory glands	533 ± 36	4 of 4	4.30	Up
Virgin spermatheca	278 ± 15	4 of 4	2.22	Up
Mated spermatheca	298 ± 14	4 of 4	2.39	Up
Adult carcass	134 ± 4	4 of 4	1.10	None
Larval CNS	591 ± 55	4 of 4	4.72	Up
Larval Salivary gland	507 ± 6	4 of 4	4.05	Up
Larval midgut	347 ± 8	4 of 4	2.77	Up
Larval tubule	269 ± 10	4 of 4	2.20	Up
Larval hindgut	290 ± 9	4 of 4	2.32	Up
Larval fat body	281 ± 12	4 of 4	2.30	Up
Larval trachea	398 ± 18	4 of 4	3.18	Up
Larval carcass	234 ± 13	4 of 4	1.87	Up
S2 cells (growing)	443 ± 6	4 of 4	3.54	Up
Whole fly	125 ± 9	4 of 4

Looking for CG9738-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720