FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9790-RA through 18771 annotations produced 1 hits

chr3R:4540921-4541578 (-) // 100.0 // (Cyclin-dependent kinase subunit 85A):

Annotation Number : CG9790
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID :
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1629876_at
Accessions : protein= , nucleotide= NP_649817;
Pathway : 0007049 // cell cycle // inferred from electronic annotation /// 0007067 // mitosis // inferred from mutant phenotype //
BioGrid reports that CG9790 interacts with CG5363 CG11182 CG7281 CG10308 CG9772 CG2189 CG6191 CG5708 CG31000 CG7948 CG5731 CG15218 CG2865 CG31811 CG8667 CG18273 CG15112 CG17964 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	95 ± 3	4 of 4	0.90	None
Head	56 ± 6	4 of 4	0.50	Down
Eye	65 ± 1	4 of 4	0.61	Down
Thoracicoabdominal ganglion	92 ± 2	4 of 4	0.90	None
Salivary gland	49 ± 0	4 of 4	0.45	Down
Crop	105 ± 5	4 of 4	1.00	None
Midgut	43 ± 1	4 of 4	0.40	Down
Tubule	66 ± 4	4 of 4	0.60	Down
Hindgut	72 ± 3	4 of 4	0.70	Down
Heart	68 ± 5	4 of 4	0.63	Down
Fat body	54 ± 3	4 of 4	0.50	Down
Ovary	178 ± 3	4 of 4	1.70	Up
Testis	120 ± 3	4 of 4	1.10	None
Male accessory glands	24 ± 3	2 of 4	0.20	Down
Virgin spermatheca	24 ± 0	4 of 4	0.23	Down
Mated spermatheca	24 ± 2	4 of 4	0.23	Down
Adult carcass	130 ± 11	4 of 4	1.20	None
Larval CNS	94 ± 8	4 of 4	0.87	None
Larval Salivary gland	44 ± 1	4 of 4	0.41	Down
Larval midgut	31 ± 2	4 of 4	0.29	Down
Larval tubule	62 ± 2	4 of 4	0.60	Down
Larval hindgut	41 ± 1	4 of 4	0.38	Down
Larval fat body	126 ± 12	4 of 4	1.20	None
Larval trachea	108 ± 8	4 of 4	1.00	None
Larval carcass	57 ± 4	4 of 4	0.53	Down
S2 cells (growing)	137 ± 1	4 of 4	1.27	Up
Whole fly	108 ± 5	4 of 4

Looking for CG9790-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720