FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9805-RA through 18771 annotations produced 1 hits

eIF3-S10 (eIF3-S10):

Annotation Number : CG9805
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037249
Gbrowse : chr3R:255623-259652 (-) // 100.0 //
Probeset : 1631404_at
Accessions : protein= NP_649470;, nucleotide= NM_141213;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005829 // cytosol // inferred from sequence or structur
Interpro : 0003743 // translation initiation factor activity // inferred from sequence or structural similarity /// 0003743 // tran
FlyMine data for FBgn0037249.
TRiP has 3 RNAi stocks for FBgn0037249 available for purchase.
VDRC has 1 RNAi stocks for FBgn0037249 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	397 ± 3	4 of 4	0.80	Down
Head	360 ± 16	4 of 4	0.70	Down
Eye	749 ± 46	4 of 4	1.45	Up
Thoracicoabdominal ganglion	476 ± 7	4 of 4	0.90	None
Salivary gland	852 ± 31	4 of 4	1.65	Up
Crop	392 ± 13	4 of 4	0.80	Down
Midgut	288 ± 15	4 of 4	0.60	Down
Tubule	736 ± 15	4 of 4	1.40	Up
Hindgut	401 ± 9	4 of 4	0.80	Down
Heart	553 ± 20	4 of 4	1.07	None
Fat body	617 ± 32	4 of 4	1.19	Up
Ovary	620 ± 12	4 of 4	1.20	Up
Testis	310 ± 6	4 of 4	0.60	Down
Male accessory glands	1209 ± 19	4 of 4	2.30	Up
Virgin spermatheca	1407 ± 23	4 of 4	2.72	Up
Mated spermatheca	1331 ± 35	4 of 4	2.57	Up
Adult carcass	487 ± 6	4 of 4	0.90	None
Larval CNS	683 ± 16	4 of 4	1.32	Up
Larval Salivary gland	1492 ± 37	4 of 4	2.89	Up
Larval midgut	271 ± 16	4 of 4	0.53	Down
Larval tubule	729 ± 30	4 of 4	1.40	Up
Larval hindgut	717 ± 24	4 of 4	1.39	Up
Larval fat body	444 ± 44	4 of 4	0.90	None
Larval trachea	875 ± 39	4 of 4	1.69	Up
Larval carcass	654 ± 20	4 of 4	1.27	Up
S2 cells (growing)	1025 ± 32	4 of 4	1.98	Up
Whole fly	517 ± 21	4 of 4

Looking for CG9805-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720