Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG9829-RA through 18771 annotations produced 1 hits



poly (poly):

Annotation Number : CG9829
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0086371
Gbrowse : chr3R:9187573-9192625 (-) // 100.0 //
Probeset : 1627983_at
Accessions : protein= NP_524343;, nucleotide= NM_079619;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0086371.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain292 ± 64 of 4 0.90None
Head273 ± 94 of 4 0.90None
Eye226 ± 84 of 4 0.73Down
Thoracicoabdominal ganglion298 ± 154 of 4 1.00None
Salivary gland348 ± 144 of 4 1.12None
Crop297 ± 74 of 4 1.00None
Midgut224 ± 54 of 4 0.70Down
Tubule832 ± 904 of 4 2.70Up
Hindgut253 ± 34 of 4 0.80Down
Heart319 ± 134 of 4 1.03None
Fat body249 ± 164 of 4 0.81Down
Ovary471 ± 54 of 4 1.50Up
Testis679 ± 354 of 4 2.20Up
Male accessory glands385 ± 194 of 4 1.20Up
Virgin spermatheca447 ± 194 of 4 1.44Up
Mated spermatheca509 ± 274 of 4 1.65Up
Adult carcass283 ± 134 of 4 0.90None
Larval CNS375 ± 224 of 4 1.21Up
Larval Salivary gland390 ± 184 of 4 1.26Up
Larval midgut145 ± 54 of 4 0.47Down
Larval tubule334 ± 74 of 4 1.10None
Larval hindgut224 ± 24 of 4 0.72Down
Larval fat body406 ± 204 of 4 1.30Up
Larval trachea363 ± 314 of 4 1.17Up
Larval carcass214 ± 94 of 4 0.69Down
S2 cells (growing)200 ± 24 of 4 0.65Down
Whole fly309 ± 144 of 4

Looking for CG9829-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime