FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9856-RA through 18771 annotations produced 1 hits

Protein tyrosine phosphatase-ERK/Enhancer of Ras1 (PTP-ER):

Annotation Number : CG9856
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0016641
Gbrowse : chr2R:17506888-17511947 (-) // 100.0 //
Probeset : 1629795_at
Accessions : protein= NP_726092;, nucleotide= NM_166465;
Pathway : 0005737 // cytoplasm // inferred from direct assay
Interpro : 0004721 // phosphoprotein phosphatase activity // inferred from electronic annotation /// 0004725 // protein tyrosine ph
FlyMine data for FBgn0016641.
BDGP gene expression has embryonic in situ data for PTP-ER: 4 pix of staining in 1 body parts.
BioGrid reports that CG9856 interacts with CG2845 CG2845 CG2845 CG2845 CG9375 CG9375 CG9375 CG9375 CG12559 CG12559 CG15793 CG15793 CG2899 CG2899 .
TRiP has 1 RNAi stocks for FBgn0016641 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	324 ± 7	4 of 4	3.90	Up
Head	115 ± 4	4 of 4	1.40	Up
Eye	93 ± 2	4 of 4	1.12	Up
Thoracicoabdominal ganglion	237 ± 4	4 of 4	2.80	Up
Salivary gland	70 ± 4	4 of 4	0.84	Down
Crop	123 ± 2	4 of 4	1.50	Up
Midgut	34 ± 1	4 of 4	0.40	Down
Tubule	33 ± 1	4 of 4	0.40	Down
Hindgut	93 ± 2	4 of 4	1.10	Up
Heart	72 ± 5	4 of 4	0.87	None
Fat body	85 ± 6	4 of 4	1.02	None
Ovary	226 ± 3	4 of 4	2.70	Up
Testis	24 ± 1	4 of 4	0.30	Down
Male accessory glands	79 ± 4	4 of 4	0.90	None
Virgin spermatheca	57 ± 2	4 of 4	0.69	Down
Mated spermatheca	57 ± 5	4 of 4	0.69	Down
Adult carcass	97 ± 2	4 of 4	1.20	Up
Larval CNS	182 ± 11	4 of 4	2.19	Up
Larval Salivary gland	70 ± 3	4 of 4	0.84	Down
Larval midgut	45 ± 2	4 of 4	0.54	Down
Larval tubule	38 ± 1	4 of 4	0.50	Down
Larval hindgut	88 ± 2	4 of 4	1.06	None
Larval fat body	53 ± 2	4 of 4	0.60	Down
Larval trachea	71 ± 3	4 of 4	0.86	Down
Larval carcass	95 ± 5	4 of 4	1.15	None
S2 cells (growing)	89 ± 1	4 of 4	1.08	None
Whole fly	83 ± 2	4 of 4

Looking for CG9856-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720