FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG9884-RC through 18771 annotations produced 1 hits

transcript-near-decapentaplegic (oaf):

Annotation Number : CG9884
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011818
Gbrowse : chr2L:2492954-2497357 (+) // 100.0 //
Probeset : 1624913_s_at
Accessions : protein= NP_477040; /// NP_722815; /// NP_722816; /// NP_787963;, nucleotide= NM_057692; /// NM_164489; /// NM_164490; /// NM_175949;
FlyMine data for FBgn0011818.
BDGP gene expression has embryonic in situ data for oaf: 17 pix of staining in 26 body parts.
TRiP has 1 RNAi stocks for FBgn0011818 available for purchase.
VDRC has 3 RNAi stocks for FBgn0011818 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	100 ± 2	4 of 4	1.10	None
Head	26 ± 4	4 of 4	0.30	Down
Eye	25 ± 4	4 of 4	0.27	Down
Thoracicoabdominal ganglion	75 ± 17	4 of 4	0.80	None
Salivary gland	28 ± 4	4 of 4	0.30	Down
Crop	31 ± 1	4 of 4	0.30	Down
Midgut	38 ± 2	4 of 4	0.40	Down
Tubule	14 ± 0	3 of 4	0.20	Down
Hindgut	22 ± 1	4 of 4	0.20	Down
Heart	24 ± 2	4 of 4	0.25	Down
Fat body	35 ± 3	4 of 4	0.37	Down
Ovary	167 ± 6	4 of 4	1.80	Up
Testis	269 ± 15	4 of 4	2.80	Up
Male accessory glands	22 ± 3	4 of 4	0.20	Down
Virgin spermatheca	15 ± 1	4 of 4	0.17	Down
Mated spermatheca	17 ± 0	4 of 4	0.18	Down
Adult carcass	25 ± 3	3 of 4	0.30	Down
Larval CNS	43 ± 6	4 of 4	0.46	Down
Larval Salivary gland	29 ± 3	0 of 4	0.31	Down
Larval midgut	28 ± 3	2 of 4	0.29	Down
Larval tubule	18 ± 1	4 of 4	0.20	Down
Larval hindgut	20 ± 2	4 of 4	0.22	Down
Larval fat body	77 ± 18	4 of 4	0.80	None
Larval trachea	27 ± 6	4 of 4	0.29	Down
Larval carcass	24 ± 3	4 of 4	0.26	Down
S2 cells (growing)	68 ± 1	4 of 4	0.71	Down
Whole fly	95 ± 2	4 of 4

Looking for CG9884-RC. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720